Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 OR5BM1P-201ENST00000512021 366 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 SNORA48.10-201ENST00000516965 160 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 AC025884.1-201ENST00000556034 378 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 AC090515.3-201ENST00000560431 315 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 MIR4472-2-201ENST00000582069 67 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 AL354984.3-201ENST00000604803 325 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 AC009090.3-201ENST00000616553 565 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 MIR8069-1-201ENST00000616627 86 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 uc_338.13-201ENST00000618243 179 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 AL023881.1-201ENST00000621088 301 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 MIR8069-2-201ENST00000621412 86 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL20A1Q9P218 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL20A1Q9P218 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 OR51H2P-202ENST00000641424 3046 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 AC107068.1-201ENST00000563286 4218 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 MTND5P31-201ENST00000419366 1374 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 AP000526.1-201ENST00000603308 1388 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.03□□□□□ -1.6
COL20A1Q9P218 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
COL20A1Q9P218 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 AC009951.1-201ENST00000623674 2614 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AL390862.1-201ENST00000635467 1469 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 BMS1P3-201ENST00000372011 932 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 RNU1-63P-201ENST00000383902 164 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 Y_RNA.408-201ENST00000383987 102 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 RPL31P52-201ENST00000407532 367 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 TIMM9P2-201ENST00000419324 266 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 RPL36AP10-201ENST00000421785 322 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 RPEP2-201ENST00000432149 701 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 B3GNT2P1-201ENST00000434960 952 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 AL445567.1-201ENST00000439121 144 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AL591503.2-201ENST00000442314 1005 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 KRT19P6-201ENST00000510983 209 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 RFPL4AP5-201ENST00000514977 504 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 TRAV15-201ENST00000556680 249 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AC093591.2-201ENST00000565254 3843 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AC018552.3-201ENST00000567416 561 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AC074051.3-201ENST00000570238 358 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AC091178.1-203ENST00000584586 279 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AC004987.4-201ENST00000603383 338 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AL163642.2-201ENST00000604722 1019 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AP002360.3-201ENST00000607673 710 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AL136981.2-201ENST00000617319 734 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 MIR3653-201ENST00000625572 110 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 AL445523.1-201ENST00000451184 1362 ntBASIC5.02□□□□□ -1.61
COL20A1Q9P218 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.02□□□□□ -1.61
COL20A1Q9P218 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL20A1Q9P218 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL20A1Q9P218 AL451142.2-201ENST00000429076 2090 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 AL158163.1-201ENST00000603915 1649 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC107081.3-201ENST00000612715 2034 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 AL121657.1-201ENST00000327215 531 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 RNU6-251P-201ENST00000363235 104 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 RNU6-1200P-201ENST00000384162 107 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 MIR506-201ENST00000384998 124 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC097374.1-203ENST00000400783 485 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms