Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS45Q9NRW7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS45Q9NRW7 AC079171.1-201ENST00000568788 914 ntBASIC4.9□□□□□ -1.63
VPS45Q9NRW7 AP003973.1-201ENST00000604639 691 ntBASIC4.9□□□□□ -1.63
VPS45Q9NRW7 AL109618.2-201ENST00000605527 211 ntBASIC4.9□□□□□ -1.63
VPS45Q9NRW7 AL354760.1-201ENST00000608357 643 ntBASIC4.9□□□□□ -1.63
VPS45Q9NRW7 AC007497.1-201ENST00000610421 561 ntBASIC4.9□□□□□ -1.63
VPS45Q9NRW7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS45Q9NRW7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
VPS45Q9NRW7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
VPS45Q9NRW7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS45Q9NRW7 FAM157B-203ENST00000639350 358 ntBASIC4.9□□□□□ -1.63
VPS45Q9NRW7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS45Q9NRW7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS45Q9NRW7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.63
VPS45Q9NRW7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS45Q9NRW7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS45Q9NRW7 MAPK10-320ENST00000641462 6696 ntBASIC4.9□□□□□ -1.63
VPS45Q9NRW7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 MIR217-201ENST00000384817 110 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 SNORA57.1-201ENST00000391227 145 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 ATP5F1P3-201ENST00000397213 657 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AP000580.1-201ENST00000404439 358 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 MTCO3P31-201ENST00000405526 789 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 RNU4-25P-201ENST00000410569 230 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 RN7SKP182-201ENST00000410772 298 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AL139421.1-201ENST00000423010 169 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 IFNNP1-201ENST00000429219 553 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 VN1R108P-201ENST00000431580 830 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AC016831.4-201ENST00000438302 307 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 MTCYBP34-201ENST00000439552 670 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 MTND3P1-201ENST00000441336 220 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 MTCO2P25-201ENST00000447065 681 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AL109741.2-201ENST00000455561 343 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 PNPLA4P1-201ENST00000458328 305 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 RPL7AP28-201ENST00000464513 571 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AC108734.3-201ENST00000481241 1165 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 LINC00888-204ENST00000487386 421 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 DYNLL1P6-201ENST00000503440 264 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 RNU6-202P-201ENST00000515998 96 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AC074051.3-201ENST00000570238 358 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 NBR2-204ENST00000587322 63 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AC133552.5-201ENST00000604266 540 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 MIR6716-201ENST00000613413 80 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AC023158.2-201ENST00000614876 543 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AL121873.1-201ENST00000616013 524 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 AP000776.1-201ENST00000530032 1663 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS45Q9NRW7 ZFRP1-201ENST00000457579 2970 ntBASIC4.89□□□□□ -1.63
VPS45Q9NRW7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VPS45Q9NRW7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS45Q9NRW7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VPS45Q9NRW7 TLK1P1-201ENST00000456760 2440 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS45Q9NRW7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS45Q9NRW7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VPS45Q9NRW7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS45Q9NRW7 AL590240.1-201ENST00000334118 313 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 RNA5SP447-201ENST00000363749 119 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 RNU1-85P-201ENST00000364127 164 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 RNU6-115P-201ENST00000364310 107 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS45Q9NRW7 SNORA48.7-201ENST00000391302 135 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 TAF9BP1-201ENST00000396646 746 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 AL049697.2-201ENST00000403708 294 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS45Q9NRW7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
VPS45Q9NRW7 RNU6-757P-201ENST00000410334 100 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 RN7SKP263-201ENST00000411194 309 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 NRBF2P2-201ENST00000413087 861 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 RPL31P2-201ENST00000413849 377 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 MRPS36P1-201ENST00000421291 307 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 AC004448.2-201ENST00000422360 586 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 Z93242.1-201ENST00000427102 353 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS45Q9NRW7 ATP5F1P1-201ENST00000433775 569 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 AC010881.1-201ENST00000433830 235 ntBASIC4.88□□□□□ -1.63
VPS45Q9NRW7 ARL4AP3-201ENST00000441452 574 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms