Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC008873.1-201ENST00000625051 138 ntBASIC10.83□□□□□ -0.68
SCAF1Q9H7N4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC10.83□□□□□ -0.68
SCAF1Q9H7N4 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 RNU4-44P-201ENST00000363050 141 ntBASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 LDHAP5-201ENST00000394996 622 ntBASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 GLULP6-201ENST00000399502 913 ntBASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 MRPS21P1-201ENST00000453850 223 ntBASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 RN7SL153P-201ENST00000486501 292 ntBASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 RNU6-798P-201ENST00000516912 103 ntBASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 MIR3684-201ENST00000579779 74 ntBASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 AL158032.1-201ENST00000605401 106 ntBASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 MIR3976-201ENST00000606807 139 ntBASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 AL596275.2-208ENST00000641192 594 ntBASIC10.82□□□□□ -0.68
SCAF1Q9H7N4 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 AC110716.2-201ENST00000563865 3945 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 Y_RNA.504-201ENST00000384481 104 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 MIR187-201ENST00000385062 109 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 SNORD73A-201ENST00000386062 65 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 RN7SKP222-201ENST00000410651 315 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 GAPDHP57-201ENST00000424400 585 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 FABP5P13-201ENST00000452144 328 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 AC112484.3-201ENST00000505910 329 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 AC100823.2-201ENST00000518337 699 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 AC174048.1-201ENST00000603389 144 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 Y_RNA.778-201ENST00000620203 90 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 AC099667.1-201ENST00000624222 469 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 CDRT1-208ENST00000630868 794 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 MIR1910-201ENST00000636955 80 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 AC104083.1-201ENST00000569449 2615 ntBASIC10.81□□□□□ -0.68
SCAF1Q9H7N4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 AC020978.6-201ENST00000571197 3177 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 RNA5SP107-201ENST00000411358 122 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 RPSAP60-201ENST00000415403 880 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 AL512882.1-201ENST00000436086 832 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 AC099670.1-201ENST00000455141 783 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 RN7SL149P-201ENST00000465197 281 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 RPL23AP65-201ENST00000475608 468 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms