Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 FABP5P5-201ENST00000515537 406 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 RNU6-202P-201ENST00000515998 96 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 RNA5SP216-201ENST00000516111 123 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 snoU109.6-201ENST00000516831 118 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 OR4A45P-201ENST00000529954 901 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 SERPINE4P-201ENST00000554978 281 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 CYCSP2-201ENST00000558168 301 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC087481.2-201ENST00000565492 330 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 MIR4528-201ENST00000577763 90 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 MIR548AB-201ENST00000584917 84 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC069307.1-201ENST00000602820 447 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC115286.1-201ENST00000604298 434 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 TAS2R6P-201ENST00000605022 826 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 IMMP1LP1-201ENST00000605170 488 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC026368.1-201ENST00000614934 690 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC010300.1-201ENST00000600671 5134 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC019072.1-201ENST00000604535 1551 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 AC012020.1-201ENST00000624541 1728 ntBASIC4.69□□□□□ -1.66
AMBRA1Q9C0C7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 GSTM3P2-201ENST00000412746 530 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 RPL35AP24-201ENST00000413846 330 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 HMGB1P11-201ENST00000413899 637 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 MTND1P23-201ENST00000416931 372 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC083875.1-201ENST00000419509 405 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 MTND4LP11-201ENST00000422184 280 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AL389915.1-201ENST00000422463 466 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 CKS1BP6-201ENST00000424932 240 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 ZYG11AP1-201ENST00000430329 837 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AL031667.1-201ENST00000440222 725 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 MTND1P1-201ENST00000445453 368 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 Z92846.1-201ENST00000456203 268 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 RPL35AP28-201ENST00000459730 331 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 RN7SL443P-201ENST00000464331 290 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC108751.2-201ENST00000469993 231 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC110775.1-201ENST00000513721 462 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC087883.1-201ENST00000551882 391 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC087763.1-201ENST00000603391 286 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AL589743.7-201ENST00000612637 233 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC027807.2-201ENST00000616099 408 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC099654.12-201ENST00000639868 649 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 OR2L1P-202ENST00000641567 1023 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC083843.3-201ENST00000623679 2186 ntBASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.68□□□□□ -1.66
AMBRA1Q9C0C7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms