Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AP005639.2-201ENST00000527592 928 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 MIR1273E-201ENST00000581165 102 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 OR7E18P-201ENST00000592589 702 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC104785.1-201ENST00000603220 588 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AL035413.2-201ENST00000604801 525 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AP001521.1-201ENST00000609150 300 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 PART1_1.1-201ENST00000611761 217 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC243773.3-201ENST00000613270 256 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC112487.2-201ENST00000637950 304 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 MAPK10-328ENST00000641553 4009 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 TCP11X1-202ENST00000622971 1372 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AC104623.2-202ENST00000623477 4002 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AL512646.1-201ENST00000269395 1077 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 OR11H4-201ENST00000315409 1082 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 SDCBPP3-201ENST00000419629 891 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 FABP7P1-201ENST00000424004 391 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AL513185.2-201ENST00000425543 193 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 RPS24P8-201ENST00000431490 402 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 FCF1P1-201ENST00000432690 571 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AC002486.1-201ENST00000435098 391 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 RAD23BP3-201ENST00000454157 1152 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 Z82190.1-201ENST00000454534 490 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 SIAH1P1-201ENST00000479411 923 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 EIF3KP3-201ENST00000514461 639 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 SCARNA20.4-201ENST00000516969 131 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AC008562.1-201ENST00000521763 330 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AL359212.1-201ENST00000556608 614 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AP001180.3-201ENST00000582221 145 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 MIR4637-201ENST00000582405 84 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AC022916.3-201ENST00000592961 742 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AC006272.2-201ENST00000594725 163 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 NRBF2P5-201ENST00000603087 788 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 AC108738.1-201ENST00000603703 237 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
FOXP3Q9BZS1 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
FOXP3Q9BZS1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FOXP3Q9BZS1 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FOXP3Q9BZS1 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FOXP3Q9BZS1 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.65□□□□□ -1.51
FOXP3Q9BZS1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
FOXP3Q9BZS1 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.65□□□□□ -1.51
FOXP3Q9BZS1 CASC19-284ENST00000642142 1868 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 RNU6-317P-201ENST00000384031 107 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms