Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 HMGN1P11-201ENST00000508668 303 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AC108120.2-201ENST00000512973 294 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AC005798.1-201ENST00000513715 387 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 NARSP2-201ENST00000518524 679 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 HIGD1AP18-201ENST00000520730 278 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 MIR4429-201ENST00000580105 73 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AC020914.6-201ENST00000594327 272 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AC020914.4-201ENST00000597690 277 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AC010591.1-201ENST00000603941 649 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 RNU6-368P-201ENST00000620928 107 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AC103858.2-201ENST00000621471 543 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 RNU6-538P-201ENST00000622329 107 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AP003476.1-201ENST00000623984 516 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AP003485.1-201ENST00000625093 753 ntBASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIN3AQ96ST3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 OTUD4P1-201ENST00000237841 3067 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 SNORA72.3-201ENST00000365074 132 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AL359837.1-201ENST00000381357 287 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 RNU6-729P-201ENST00000384399 107 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AC093578.1-201ENST00000415219 368 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 MTND4P11-201ENST00000417020 1058 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AC011242.1-201ENST00000433596 1158 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 HSPD1P21-201ENST00000436541 245 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AC069540.1-201ENST00000446320 988 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 U3.44-201ENST00000458938 192 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 RPL21P18-201ENST00000469899 480 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AC007458.1-201ENST00000542812 373 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 CD24P2-201ENST00000565486 219 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AC124283.4-201ENST00000581815 456 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AC078880.5-201ENST00000617845 421 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AP001005.3-201ENST00000622049 129 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AC093875.1-201ENST00000623688 504 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 OR4G3P-201ENST00000633500 913 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AC027287.1-201ENST00000553115 1453 ntBASIC5.17□□□□□ -1.58
SIN3AQ96ST3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIN3AQ96ST3 AC022893.2-201ENST00000564832 3296 ntBASIC5.16□□□□□ -1.58
SIN3AQ96ST3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 SNORA71.3-201ENST00000362582 128 ntBASIC5.16□□□□□ -1.58
SIN3AQ96ST3 MIR490-201ENST00000384865 128 ntBASIC5.16□□□□□ -1.58
SIN3AQ96ST3 MTCO1P43-201ENST00000431831 488 ntBASIC5.16□□□□□ -1.58
SIN3AQ96ST3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 AL450263.2-201ENST00000439400 589 ntBASIC5.16□□□□□ -1.58
SIN3AQ96ST3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 AC025518.1-201ENST00000479856 347 ntBASIC5.16□□□□□ -1.58
SIN3AQ96ST3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 RN7SKP18-201ENST00000516005 275 ntBASIC5.16□□□□□ -1.58
SIN3AQ96ST3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 YWHAZP1-201ENST00000556286 722 ntBASIC5.16□□□□□ -1.58
SIN3AQ96ST3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 AL357559.1-201ENST00000622228 274 ntBASIC5.16□□□□□ -1.58
SIN3AQ96ST3 AL627171.1-201ENST00000618845 1308 ntBASIC5.16□□□□□ -1.58
SIN3AQ96ST3 MFSD8-213ENST00000641134 1327 ntBASIC5.16□□□□□ -1.58
SIN3AQ96ST3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.16□□□□□ -1.58
SIN3AQ96ST3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SIN3AQ96ST3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SIN3AQ96ST3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SIN3AQ96ST3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.15□□□□□ -1.58
SIN3AQ96ST3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
SIN3AQ96ST3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SIN3AQ96ST3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SIN3AQ96ST3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SIN3AQ96ST3 SFR1P2-201ENST00000421841 730 ntBASIC5.15□□□□□ -1.59
SIN3AQ96ST3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms