Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 ZNF833P-201ENST00000424938 1494 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS50Q96JG6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS50Q96JG6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC134882.1-201ENST00000603738 1676 ntBASIC4.73□□□□□ -1.65
VPS50Q96JG6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS50Q96JG6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS50Q96JG6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 RNU6-253P-201ENST00000384730 105 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AL138785.1-201ENST00000425821 331 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 IPMKP1-201ENST00000425988 855 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC244035.1-201ENST00000430042 390 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 PSMD10P3-201ENST00000437000 448 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC069285.2-201ENST00000440210 275 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC112498.1-201ENST00000444401 332 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 NDUFA5P7-201ENST00000452914 242 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 RPL35AP28-201ENST00000459730 331 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC068724.1-201ENST00000487100 792 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 RPL7P38-201ENST00000488396 739 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 RN7SL441P-201ENST00000492388 296 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC104685.1-201ENST00000502445 371 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC010350.1-201ENST00000504908 231 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC025674.1-201ENST00000507074 324 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 RNU6-1261P-201ENST00000517194 104 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 OR5AK1P-201ENST00000524837 922 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 CR383656.6-201ENST00000550518 394 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS50Q96JG6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 ROCK1P1-201ENST00000573767 549 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC105254.2-201ENST00000603636 436 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC006270.3-201ENST00000605967 1036 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC091979.2-201ENST00000607514 214 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC123768.4-201ENST00000616244 701 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC019206.1-201ENST00000621938 425 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC092192.1-201ENST00000633154 1018 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC055839.1-201ENST00000634467 498 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS50Q96JG6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS50Q96JG6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS50Q96JG6 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS50Q96JG6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS50Q96JG6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS50Q96JG6 AL390237.1-201ENST00000404226 1415 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 AC011477.1-204ENST00000623416 1325 ntBASIC4.72□□□□□ -1.65
VPS50Q96JG6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.71□□□□□ -1.65
VPS50Q96JG6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VPS50Q96JG6 AL672167.1-203ENST00000641299 2975 ntBASIC4.71□□□□□ -1.65
VPS50Q96JG6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VPS50Q96JG6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS50Q96JG6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS50Q96JG6 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS50Q96JG6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS50Q96JG6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 RN7SKP95-201ENST00000362860 303 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 MT-TH-201ENST00000387441 69 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 SNORA26.8-201ENST00000391306 124 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 TMSB4XP8-201ENST00000402089 135 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 PRELID3BP11-201ENST00000414230 479 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 TMSB4XP6-201ENST00000415187 135 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 MTCO3P1-205ENST00000422088 832 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms