Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PPIAP3-201ENST00000450588 505 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC146507.1-201ENST00000468335 354 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 RNU6-885P-201ENST00000516607 104 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 MIR2114-201ENST00000516645 80 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 SCARNA1-201ENST00000517138 166 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 AP001781.1-201ENST00000530977 207 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 LRRC6P1-201ENST00000532188 885 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 OR8L1P-201ENST00000534005 955 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC096947.1-201ENST00000603233 470 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC005084.1-201ENST00000605160 304 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 MIR7155-201ENST00000615925 56 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC109809.1-201ENST00000619665 545 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC123767.1-202ENST00000620407 817 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AL049536.1-201ENST00000625043 744 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 MFSD8-245ENST00000641743 948 ntBASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RFT1Q96AA3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFT1Q96AA3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFT1Q96AA3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFT1Q96AA3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFT1Q96AA3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFT1Q96AA3 AC000367.1-201ENST00000452711 1766 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFT1Q96AA3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC117529.2-201ENST00000512159 2068 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 FAM3C2-201ENST00000312214 681 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 RNA5SP322-201ENST00000363617 119 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 RNU1-89P-201ENST00000384592 164 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 MIR298-201ENST00000401212 88 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 BMS1P19-201ENST00000433925 393 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 RPL36AP15-201ENST00000444514 266 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 RN7SL354P-201ENST00000469282 294 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC083982.1-201ENST00000485679 344 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC011005.3-201ENST00000491624 395 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 RNF138P1-201ENST00000502765 546 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC093755.1-201ENST00000512950 1023 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC104057.1-201ENST00000515547 497 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 HIGD1AP3-201ENST00000515857 278 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 Vault.1-201ENST00000516474 102 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 ARL2BPP5-201ENST00000523141 481 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AP000790.1-201ENST00000528891 737 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 OR5BC1P-201ENST00000529327 739 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC068790.7-201ENST00000602347 528 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AP003973.1-201ENST00000604639 691 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AL121652.1-201ENST00000608851 448 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC006065.5-201ENST00000623427 349 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC090772.4-201ENST00000623599 362 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC010608.3-201ENST00000625048 527 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFT1Q96AA3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC026951.1-201ENST00000559530 2459 ntBASIC3.79□□□□□ -1.8
RFT1Q96AA3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFT1Q96AA3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.79□□□□□ -1.8
RFT1Q96AA3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFT1Q96AA3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms