Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
ERCC4Q92889 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
ERCC4Q92889 RPL7L1P13-201ENST00000511702 739 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC4Q92889 RN7SKP283-201ENST00000517197 270 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AC087276.1-201ENST00000529659 480 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.51□□□□□ -1.53
ERCC4Q92889 PSMB7P1-201ENST00000556349 514 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC245505.1-201ENST00000556398 224 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC4Q92889 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.51□□□□□ -1.53
ERCC4Q92889 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC138749.5-201ENST00000611461 208 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AC008498.1-201ENST00000613012 531 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AL049794.2-201ENST00000616301 365 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AL357080.1-201ENST00000617394 239 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC092650.2-201ENST00000619984 902 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC015726.3-201ENST00000624501 418 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC120349.2-201ENST00000625002 298 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 LINC01739-205ENST00000641890 573 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC4Q92889 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC4Q92889 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.51□□□□□ -1.53
ERCC4Q92889 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC4Q92889 AC092447.7-201ENST00000422212 1621 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC092079.1-201ENST00000558620 1985 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.51□□□□□ -1.53
ERCC4Q92889 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.51□□□□□ -1.53
ERCC4Q92889 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
ERCC4Q92889 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 RNU6-433P-201ENST00000363216 104 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 SNORA66-201ENST00000384792 133 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ERCC4Q92889 MTCO3P31-201ENST00000405526 789 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 RNU4-34P-201ENST00000410431 124 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 TBCAP2-201ENST00000416175 326 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 AL512649.1-201ENST00000428997 581 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC4Q92889 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC4Q92889 MTND2P20-201ENST00000440805 661 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 CNOT7P2-201ENST00000441051 832 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 TDGF1P1-201ENST00000445734 527 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.5□□□□□ -1.53
ERCC4Q92889 PTMAP3-201ENST00000447474 330 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.5□□□□□ -1.53
ERCC4Q92889 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 RPL23AP12-201ENST00000467573 473 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 RPS18P6-201ENST00000476880 458 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 AC108078.3-201ENST00000502633 489 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 HIGD1AP14-201ENST00000507617 282 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 MTCO1P30-201ENST00000515244 580 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.5□□□□□ -1.53
ERCC4Q92889 AC027309.2-201ENST00000520566 192 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.5□□□□□ -1.53
ERCC4Q92889 AC016957.1-201ENST00000534895 309 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC4Q92889 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.5□□□□□ -1.53
ERCC4Q92889 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.5□□□□□ -1.53
ERCC4Q92889 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC4Q92889 AC012065.4-201ENST00000602445 679 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 RNF138P2-201ENST00000603490 592 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 AC091805.2-201ENST00000603848 235 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 IMMP1LP1-201ENST00000605170 488 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC4Q92889 AC013476.2-201ENST00000614456 459 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ERCC4Q92889 CDRT1-208ENST00000630868 794 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC4Q92889 AC026634.1-201ENST00000634369 198 ntBASIC5.5□□□□□ -1.53
ERCC4Q92889 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ERCC4Q92889 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ERCC4Q92889 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC4Q92889 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ERCC4Q92889 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.5□□□□□ -1.53
ERCC4Q92889 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.5□□□□□ -1.53
ERCC4Q92889 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ERCC4Q92889 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.49□□□□□ -1.53
ERCC4Q92889 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ERCC4Q92889 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.49□□□□□ -1.53
ERCC4Q92889 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ERCC4Q92889 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ERCC4Q92889 AP001273.1-201ENST00000624493 3152 ntBASIC5.49□□□□□ -1.53
ERCC4Q92889 CR383658.2-201ENST00000547576 1525 ntBASIC5.49□□□□□ -1.53
ERCC4Q92889 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.49□□□□□ -1.53
ERCC4Q92889 AC012020.1-201ENST00000624541 1728 ntBASIC5.49□□□□□ -1.53
ERCC4Q92889 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ERCC4Q92889 SNURFL-201ENST00000309296 343 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms