Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 AC007496.3-201ENST00000624987 3443 ntBASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ALMS1Q8TCU4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
ALMS1Q8TCU4 RN7SKP56-201ENST00000410513 331 ntBASIC2.28□□□□□ -2.05
ALMS1Q8TCU4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.28□□□□□ -2.05
ALMS1Q8TCU4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.28□□□□□ -2.05
ALMS1Q8TCU4 BX276092.4-201ENST00000452056 248 ntBASIC2.28□□□□□ -2.05
ALMS1Q8TCU4 RN7SL432P-201ENST00000484057 298 ntBASIC2.28□□□□□ -2.05
ALMS1Q8TCU4 RNU4-29P-201ENST00000515943 174 ntBASIC2.28□□□□□ -2.05
ALMS1Q8TCU4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.28□□□□□ -2.05
ALMS1Q8TCU4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 SNORA5B-201ENST00000363786 132 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC108734.1-201ENST00000439549 399 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC093156.1-201ENST00000440382 670 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 TPTE2P3-201ENST00000441562 1189 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 RN7SL93P-201ENST00000463035 293 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 IPO8P1-201ENST00000455509 3109 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 SNORA54-201ENST00000384281 123 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 MIR1183-201ENST00000408856 89 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 IFNNP1-201ENST00000429219 553 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC140076.1-201ENST00000449897 361 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 RPS29P26-201ENST00000477483 171 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 RNU1-41P-201ENST00000516161 162 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 RNU1-48P-201ENST00000516400 162 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC106734.1-201ENST00000568646 663 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC231759.1-201ENST00000616455 597 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC004825.2-201ENST00000616634 455 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AL672296.1-201ENST00000427780 2158 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC112198.1-201ENST00000505369 1220 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 AP000255.1-201ENST00000610276 676 ntBASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALMS1Q8TCU4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 RAD1P1-201ENST00000231383 813 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 ZNF603P-201ENST00000405613 487 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 HMGB3P20-201ENST00000417997 600 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AC108938.1-201ENST00000451204 136 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 RNU7-170P-201ENST00000459303 61 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AC023598.1-201ENST00000472521 361 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AC117440.1-201ENST00000474107 571 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 H3F3AP1-201ENST00000559984 334 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AP003499.2-201ENST00000624100 483 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 SAGE4P-201ENST00000442271 3381 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AC068724.1-201ENST00000487100 792 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AC245100.7-201ENST00000609678 442 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms