Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.4□□□□□ -1.54
SYNPOQ8N3V7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNPOQ8N3V7 AC098614.4-201ENST00000607601 462 ntBASIC5.4□□□□□ -1.54
SYNPOQ8N3V7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNPOQ8N3V7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.4□□□□□ -1.54
SYNPOQ8N3V7 AL589743.7-201ENST00000612637 233 ntBASIC5.4□□□□□ -1.54
SYNPOQ8N3V7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNPOQ8N3V7 AC006338.2-201ENST00000616864 791 ntBASIC5.4□□□□□ -1.54
SYNPOQ8N3V7 MIR6133-201ENST00000617057 108 ntBASIC5.4□□□□□ -1.54
SYNPOQ8N3V7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNPOQ8N3V7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SYNPOQ8N3V7 AC006206.1-201ENST00000544842 3387 ntBASIC5.4□□□□□ -1.55
SYNPOQ8N3V7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNPOQ8N3V7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNPOQ8N3V7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNPOQ8N3V7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SYNPOQ8N3V7 AC144833.1-201ENST00000567953 4089 ntBASIC5.4□□□□□ -1.55
SYNPOQ8N3V7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SYNPOQ8N3V7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNPOQ8N3V7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AP002001.2-201ENST00000529025 1469 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AL161781.1-201ENST00000354277 403 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 RN7SKP145-201ENST00000363291 303 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 MT-TC-201ENST00000387405 66 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 GLULP6-201ENST00000399502 913 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 RNU2-15P-201ENST00000410692 191 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 HMGB3P23-201ENST00000414981 585 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 RPL26P29-201ENST00000415623 438 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 Z97055.1-201ENST00000419730 712 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC109583.1-201ENST00000432156 268 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 SDCBPP1-201ENST00000440192 890 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 TPT1P13-201ENST00000449760 499 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC079168.1-201ENST00000458741 345 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 RPS17P5-201ENST00000498293 408 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AL117351.2-201ENST00000513571 157 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC012400.1-201ENST00000518452 381 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC067852.4-201ENST00000590314 478 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC112191.3-201ENST00000604371 277 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AC087783.2-201ENST00000605070 562 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 AL022393.1-201ENST00000625142 1677 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 KPNA2P2-201ENST00000419546 1489 ntBASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
SYNPOQ8N3V7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 AC026951.1-201ENST00000559530 2459 ntBASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 AC097714.1-201ENST00000511272 1647 ntBASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 DBIP1-201ENST00000401435 260 ntBASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 AL356421.1-201ENST00000403255 413 ntBASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 RNU2-66P-201ENST00000410650 161 ntBASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 COX6B1P1-201ENST00000415962 213 ntBASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNPOQ8N3V7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms