Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 RPS6P23-201ENST00000413224 722 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AC074085.1-201ENST00000413598 418 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AC016027.5-201ENST00000427227 210 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 RPL7L1P10-201ENST00000427790 463 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 FABP7P2-201ENST00000429946 379 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 RPS3AP38-201ENST00000435889 763 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 PRPS1P1-201ENST00000445305 876 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 UBBP5-201ENST00000446970 266 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AL356010.1-201ENST00000456364 102 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AC090602.1-201ENST00000469695 252 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 RN7SKP24-201ENST00000515888 284 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 SCARNA24.1-201ENST00000516465 137 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AC107934.1-201ENST00000522215 217 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AP003072.2-201ENST00000527756 676 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AC105074.1-201ENST00000623380 3095 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 ZNF652P1-201ENST00000442420 1309 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 MAPK10-328ENST00000641553 4009 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 AC018809.2-201ENST00000602436 3823 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 CDY11P-201ENST00000447168 1651 ntBASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXR1Q6PIV2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 GTF2IP4-201ENST00000453092 2054 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 RNU6-1097P-201ENST00000363586 107 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 RNU6-38P-201ENST00000384085 107 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 Y_RNA.489-201ENST00000384410 101 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 RNU1-149P-201ENST00000390870 161 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 RNA5SP105-201ENST00000391123 113 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 RNU6-952P-201ENST00000391164 108 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 AC005522.1-201ENST00000395416 346 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 GCNT1P4-201ENST00000404096 329 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 RPL31P52-201ENST00000407532 367 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 RN7SKP151-201ENST00000410230 316 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 AC080125.1-201ENST00000414888 684 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 RNU6-333P-201ENST00000459117 107 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 UBFD1P1-201ENST00000473259 814 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 SNORA25.10-201ENST00000515926 124 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 RNU6-1334P-201ENST00000516032 105 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 Y_RNA.680-201ENST00000516441 93 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 AC105031.1-201ENST00000518550 476 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 TRIM51DP-201ENST00000529746 596 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 HAUS8P1-201ENST00000549005 542 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 AC098848.2-201ENST00000588023 330 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 SMIM12P1-201ENST00000603004 274 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 AC090525.3-201ENST00000605601 189 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 MIR6729-201ENST00000618194 65 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXR1Q6PIV2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms