Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AC005242.1-201ENST00000585658 438 ntBASIC3.14□□□□□ -1.91
RIF1Q5UIP0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
RIF1Q5UIP0 AC090971.4-201ENST00000560291 1800 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 GNG5P5-201ENST00000420444 220 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 ISCA1P6-201ENST00000427740 390 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 AC074367.1-201ENST00000438685 1125 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 AC008489.1-201ENST00000524271 483 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 AL031658.2-201ENST00000616850 651 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 SNORD39.4-201ENST00000620099 78 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 AC009963.4-201ENST00000448535 339 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 AC093815.1-201ENST00000508637 280 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 KCTD9P6-201ENST00000522306 950 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 AP002812.4-201ENST00000532139 286 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 OR6R2P-201ENST00000609216 300 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RIF1Q5UIP0 AC134882.1-201ENST00000603738 1676 ntBASIC3.13□□□□□ -1.91
RIF1Q5UIP0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 THAP12P5-201ENST00000405864 2275 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 MTCO1P9-201ENST00000505577 1534 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 MIR512-1-201ENST00000384913 84 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 MIR184-201ENST00000384962 84 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AP003122.3-201ENST00000526316 255 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 BNIP3P8-201ENST00000597863 560 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 MRPS35P3-201ENST00000603189 709 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AL356321.1-201ENST00000621360 228 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AL773545.4-201ENST00000637262 310 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AL513478.4-201ENST00000641636 310 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AL358178.1-201ENST00000407698 397 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 RN7SKP192-201ENST00000411291 327 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AC004552.1-201ENST00000419089 348 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 RNA5SP356-201ENST00000515972 94 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AC010306.1-201ENST00000523223 1117 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 AL358913.1-201ENST00000554342 121 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 CYP4A43P-201ENST00000568156 121 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 THAP12P8-201ENST00000447914 2115 ntBASIC3.12□□□□□ -1.91
RIF1Q5UIP0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RIF1Q5UIP0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 AC058791.1-201ENST00000608412 3198 ntBASIC3.11□□□□□ -1.91
RIF1Q5UIP0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 ASNSP1-201ENST00000518311 1939 ntBASIC3.11□□□□□ -1.91
RIF1Q5UIP0 HLFP1-201ENST00000402375 499 ntBASIC3.11□□□□□ -1.91
RIF1Q5UIP0 SEPT7P8-201ENST00000413308 775 ntBASIC3.11□□□□□ -1.91
RIF1Q5UIP0 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 AC026333.2-201ENST00000542164 106 ntBASIC3.11□□□□□ -1.91
RIF1Q5UIP0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 RNA5SP187-201ENST00000384400 119 ntBASIC3.11□□□□□ -1.91
RIF1Q5UIP0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 HMGB3P20-201ENST00000417997 600 ntBASIC3.11□□□□□ -1.91
RIF1Q5UIP0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 HSPE1P6-201ENST00000479457 291 ntBASIC3.11□□□□□ -1.91
RIF1Q5UIP0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.11□□□□□ -1.91
RIF1Q5UIP0 HMGB1P6-201ENST00000569046 646 ntBASIC3.11□□□□□ -1.91
RIF1Q5UIP0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.11□□□□□ -1.91
RIF1Q5UIP0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 OR5BR1P-201ENST00000524992 1330 ntBASIC3.1□□□□□ -1.91
RIF1Q5UIP0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 RNU1-70P-201ENST00000362618 164 ntBASIC3.1□□□□□ -1.91
RIF1Q5UIP0 Y_RNA.226-201ENST00000364337 114 ntBASIC3.1□□□□□ -1.91
RIF1Q5UIP0 RPS24P12-201ENST00000402084 394 ntBASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.1□□□□□ -1.91
RIF1Q5UIP0 RPS24P13-201ENST00000442520 397 ntBASIC3.1□□□□□ -1.91
RIF1Q5UIP0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms