Protein–RNA interactions for Protein: Q2TBA0

KLHL40, Kelch-like protein 40, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL40Q2TBA0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 ZNF542P-204ENST00000482727 1305 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 ZNF826P-207ENST00000622273 1910 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 RNU6-213P-201ENST00000384051 104 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 RNU6-31P-201ENST00000384388 108 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 AL583834.1-201ENST00000406943 343 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 SNORA11-201ENST00000408789 128 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 HMGB3P23-201ENST00000414981 585 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 SNRPGP5-201ENST00000456003 220 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 VN1R105P-201ENST00000486595 910 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 RNU6-1004P-201ENST00000516584 111 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 AC120057.2-201ENST00000571520 271 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 AC093227.2-201ENST00000589357 285 ntBASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.04□□□□□ -1.76
KLHL40Q2TBA0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 XIAPP3-201ENST00000312918 795 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AC007685.1-201ENST00000329806 452 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 SNORA3.3-201ENST00000408712 125 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 RN7SKP53-201ENST00000411337 315 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AC017079.2-201ENST00000416102 485 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 RNF19BPX-201ENST00000426224 625 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 RPS29P7-201ENST00000439662 171 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AL353093.1-201ENST00000441292 436 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 CDC27P1-201ENST00000445384 715 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AC108078.3-201ENST00000502633 489 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 PCNAP1-201ENST00000505363 709 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 OR5H4P-201ENST00000510851 923 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 MTND4LP31-201ENST00000514859 294 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 RN7SKP82-201ENST00000516786 223 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AC107934.2-201ENST00000518653 310 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AC084033.1-201ENST00000550830 633 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 MIR548Y-201ENST00000582739 110 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AP003117.1-201ENST00000602771 554 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 MIR7973-1-201ENST00000614683 76 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AC112200.1-201ENST00000625015 234 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AC073476.4-201ENST00000628409 72 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AL592494.2-201ENST00000425455 1548 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 SRP72P2-201ENST00000344851 1979 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 EXOC5P1-201ENST00000510543 1969 ntBASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KLHL40Q2TBA0 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 MIR148B-201ENST00000362252 99 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 MIR134-201ENST00000385258 73 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 EI24P2-201ENST00000397776 1076 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 AL445189.1-201ENST00000405722 338 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 AC245054.1-201ENST00000420944 258 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 HMGB3P5-201ENST00000428894 612 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 ELOCP11-201ENST00000436690 332 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 ELOCP16-201ENST00000444494 332 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 AL359073.1-201ENST00000448036 403 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 HMGB1P26-201ENST00000452520 628 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 AC018635.1-201ENST00000468292 1030 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 AC023598.1-201ENST00000472521 361 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 HMGB1P21-201ENST00000502313 581 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 FTH1P9-201ENST00000513251 355 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 OR4A2P-201ENST00000527276 913 ntBASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
KLHL40Q2TBA0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms