Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 HMGB3P30-201ENST00000457863 606 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AC107398.1-201ENST00000486904 505 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AC006499.6-201ENST00000511169 607 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 SETP12-201ENST00000514068 805 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 MIR548Y-201ENST00000582739 110 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AC090525.3-201ENST00000605601 189 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 MIR7975-201ENST00000619350 68 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 AC073592.7-201ENST00000623659 507 ntBASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM1Q2M3G4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AC022031.1-201ENST00000585985 2593 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 RNA5SP39-201ENST00000411245 120 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AC008065.1-201ENST00000428525 348 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 RPL34P26-201ENST00000445636 354 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 HMGB1P5-202ENST00000451497 985 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 MTND2P6-201ENST00000455337 1030 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 RPL37P3-201ENST00000456825 293 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 TMED11P-201ENST00000479478 690 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 RPL30P11-201ENST00000495304 339 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 FTH1P24-201ENST00000503502 462 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 HSPD1P15-201ENST00000505573 1122 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AC074250.1-201ENST00000511117 192 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 RN7SKP18-201ENST00000516005 275 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 OR7E13P-201ENST00000526052 910 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 CENPUP2-201ENST00000555897 1186 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AP003117.2-201ENST00000606010 545 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AC025016.1-201ENST00000616746 682 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AP006248.3-201ENST00000623580 594 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 PRO1804-201ENST00000623780 2050 ntBASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM1Q2M3G4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 OR6K3-202ENST00000368146 996 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AL390879.2-203ENST00000426943 1121 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 MTATP6P11-201ENST00000428071 670 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AL160175.1-201ENST00000428124 247 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 RPL23AP83-201ENST00000434984 473 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 RPS3AP46-201ENST00000448352 682 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AC093663.2-201ENST00000484625 313 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 Vault.1-201ENST00000516474 102 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 LINC00557-201ENST00000563184 1279 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AC092474.3-201ENST00000603022 568 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AC008638.3-201ENST00000603341 463 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 AL354760.1-201ENST00000608357 643 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 OTUD4P1-201ENST00000237841 3067 ntBASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.35□□□□□ -1.71
SHROOM1Q2M3G4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 UBE3AP2-201ENST00000429033 2259 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms