Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AL079305.1-201ENST00000623159 3008 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 MIR30E-201ENST00000362104 92 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 MIR3074-201ENST00000384885 81 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 MIR1183-201ENST00000408856 89 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AC126124.2-201ENST00000413542 321 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 BX842559.1-201ENST00000419615 532 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AC012065.2-201ENST00000421295 375 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AC093698.1-201ENST00000423843 571 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AL353597.2-202ENST00000434901 373 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AC091862.1-201ENST00000438016 1100 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 ATP5C1P1-201ENST00000441945 895 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 HMGB1P21-201ENST00000502313 581 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 snoU109.6-201ENST00000516831 118 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 OR4R3P-201ENST00000525084 838 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AC009303.3-201ENST00000591103 736 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 CKS1BP3-201ENST00000600888 237 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AL606834.2-201ENST00000602954 668 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 HSPA8P17-201ENST00000427029 1382 ntBASIC4.08□□□□□ -1.76
RFX7Q2KHR2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFX7Q2KHR2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 RNA5SP374-201ENST00000362939 125 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 AL357075.1-201ENST00000404107 726 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 RANP4-201ENST00000413361 655 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 BOLA3P4-201ENST00000418151 400 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 HSPE1P27-201ENST00000430808 296 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 AC017015.1-201ENST00000477387 286 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 MIR2276-201ENST00000516886 89 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 HIGD1AP18-201ENST00000520730 278 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 UBE2NP1-201ENST00000545592 458 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 AC011611.1-201ENST00000552179 197 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 AL365503.1-201ENST00000605247 905 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 AL034351.1-201ENST00000605288 668 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 AC015802.5-201ENST00000607478 399 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 AC067852.7-201ENST00000623270 535 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 CR383658.2-201ENST00000547576 1525 ntBASIC4.07□□□□□ -1.76
RFX7Q2KHR2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.07□□□□□ -1.76
RFX7Q2KHR2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 MIR184-201ENST00000384962 84 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AL122016.1-201ENST00000403365 367 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AC010401.1-201ENST00000463867 348 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AL049873.1-201ENST00000480540 376 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AC112184.1-201ENST00000505179 312 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AC011602.1-201ENST00000546484 331 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AC073657.2-201ENST00000605661 303 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AC023813.4-201ENST00000607580 580 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 uc_338.32-201ENST00000615087 172 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AC004825.2-201ENST00000616634 455 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 U7.8-201ENST00000619968 63 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 SCARNA15.3-201ENST00000626315 122 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 SCARNA4.1-201ENST00000628597 123 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AL049555.1-201ENST00000562834 1933 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AL592437.2-201ENST00000421655 2434 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 AL445437.1-201ENST00000623157 3087 ntBASIC4.06□□□□□ -1.76
RFX7Q2KHR2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
RFX7Q2KHR2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.05□□□□□ -1.76
RFX7Q2KHR2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
RFX7Q2KHR2 OR1AA1P-201ENST00000419597 916 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms