Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.73□□□□□ -1.65
UBE3AQ05086 AGGF1P8-201ENST00000562979 1000 ntBASIC4.73□□□□□ -1.65
UBE3AQ05086 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UBE3AQ05086 RN7SL435P-201ENST00000584418 282 ntBASIC4.73□□□□□ -1.65
UBE3AQ05086 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.73□□□□□ -1.65
UBE3AQ05086 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.73□□□□□ -1.65
UBE3AQ05086 AC007349.4-201ENST00000608114 532 ntBASIC4.73□□□□□ -1.65
UBE3AQ05086 AC023158.2-201ENST00000614876 543 ntBASIC4.73□□□□□ -1.65
UBE3AQ05086 SNX18P1Y-201ENST00000616231 511 ntBASIC4.73□□□□□ -1.65
UBE3AQ05086 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.73□□□□□ -1.65
UBE3AQ05086 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.73□□□□□ -1.65
UBE3AQ05086 AC022106.2-201ENST00000620114 757 ntBASIC4.73□□□□□ -1.65
UBE3AQ05086 AC000123.2-201ENST00000623124 461 ntBASIC4.73□□□□□ -1.65
UBE3AQ05086 AC112484.5-201ENST00000624189 228 ntBASIC4.73□□□□□ -1.65
UBE3AQ05086 AC026634.1-201ENST00000634369 198 ntBASIC4.73□□□□□ -1.65
UBE3AQ05086 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
UBE3AQ05086 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UBE3AQ05086 SCN1A-220ENST00000641603 12506 ntBASIC4.73□□□□□ -1.65
UBE3AQ05086 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
UBE3AQ05086 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.73□□□□□ -1.65
UBE3AQ05086 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
UBE3AQ05086 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.72□□□□□ -1.65
UBE3AQ05086 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.72□□□□□ -1.65
UBE3AQ05086 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
UBE3AQ05086 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
UBE3AQ05086 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UBE3AQ05086 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.72□□□□□ -1.65
UBE3AQ05086 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
UBE3AQ05086 SUGT1P1-201ENST00000379514 476 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 RNU6-441P-201ENST00000384545 106 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.72□□□□□ -1.65
UBE3AQ05086 RPL23AP47-201ENST00000408017 460 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 CEACAMP8-201ENST00000413902 580 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.72□□□□□ -1.65
UBE3AQ05086 MTCO3P1-205ENST00000422088 832 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AL389915.1-201ENST00000422463 466 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 RPL7P44-201ENST00000424827 742 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 SKP1P3-201ENST00000429280 487 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 USP9YP31-201ENST00000431405 881 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.72□□□□□ -1.65
UBE3AQ05086 AC241584.1-201ENST00000438469 1241 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC114495.1-201ENST00000441274 436 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 RPL23AP76-201ENST00000441860 458 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AL591719.1-201ENST00000444669 744 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC004022.1-201ENST00000447766 1066 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.72□□□□□ -1.65
UBE3AQ05086 RFC5P1-201ENST00000454419 874 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 USP9YP25-201ENST00000457708 443 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.72□□□□□ -1.65
UBE3AQ05086 AC022795.1-201ENST00000473808 480 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
UBE3AQ05086 RN7SL812P-201ENST00000493791 279 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.72□□□□□ -1.65
UBE3AQ05086 HMGB3P16-201ENST00000508037 287 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC008958.1-201ENST00000511047 682 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UBE3AQ05086 RNA5SP497-201ENST00000516081 97 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 RN7SKP287-201ENST00000516546 266 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UBE3AQ05086 PTP4A1P6-201ENST00000531034 478 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.72□□□□□ -1.65
UBE3AQ05086 MIR4458-201ENST00000578872 75 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.72□□□□□ -1.65
UBE3AQ05086 AC091057.2-201ENST00000602594 792 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC093424.1-201ENST00000604999 338 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC131238.1-201ENST00000617135 328 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 MIR6891-201ENST00000618788 93 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AP002782.1-201ENST00000623107 614 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC015871.5-202ENST00000623252 701 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AC098679.5-201ENST00000624394 571 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 FAM157B-203ENST00000639350 358 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AL596275.2-204ENST00000641628 552 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 AL596275.2-206ENST00000641957 626 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UBE3AQ05086 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.72□□□□□ -1.65
UBE3AQ05086 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
UBE3AQ05086 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UBE3AQ05086 AC011978.2-201ENST00000569835 2054 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
UBE3AQ05086 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.72□□□□□ -1.65
UBE3AQ05086 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
UBE3AQ05086 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
UBE3AQ05086 AL158163.1-201ENST00000603915 1649 ntBASIC4.72□□□□□ -1.65
UBE3AQ05086 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.72□□□□□ -1.65
UBE3AQ05086 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
UBE3AQ05086 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.71□□□□□ -1.65
UBE3AQ05086 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
UBE3AQ05086 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.71□□□□□ -1.65
UBE3AQ05086 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UBE3AQ05086 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE3AQ05086 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
UBE3AQ05086 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE3AQ05086 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE3AQ05086 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE3AQ05086 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
UBE3AQ05086 AL672167.1-205ENST00000641112 3080 ntBASIC4.71□□□□□ -1.66
UBE3AQ05086 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE3AQ05086 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
UBE3AQ05086 RNU6-560P-201ENST00000364007 108 ntBASIC4.71□□□□□ -1.66
UBE3AQ05086 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms