Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MIR6730-201ENST00000622213 67 ntBASIC3.86□□□□□ -1.79
CBX1P83916 AC006065.5-201ENST00000623427 349 ntBASIC3.86□□□□□ -1.79
CBX1P83916 AP001784.1-201ENST00000624107 428 ntBASIC3.86□□□□□ -1.79
CBX1P83916 HPVC1-201ENST00000629899 1198 ntBASIC3.86□□□□□ -1.79
CBX1P83916 AC093010.3-201ENST00000570269 15214 ntBASIC3.86□□□□□ -1.79
CBX1P83916 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CBX1P83916 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.86□□□□□ -1.79
CBX1P83916 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CBX1P83916 MAPK10-362ENST00000641864 4484 ntBASIC3.85□□□□□ -1.79
CBX1P83916 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CBX1P83916 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CBX1P83916 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.85□□□□□ -1.79
CBX1P83916 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CBX1P83916 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CBX1P83916 OR5P1P-201ENST00000299512 925 ntBASIC3.85□□□□□ -1.79
CBX1P83916 RNA5SP42-201ENST00000364278 115 ntBASIC3.85□□□□□ -1.79
CBX1P83916 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CBX1P83916 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.85□□□□□ -1.79
CBX1P83916 PRRC2CP1-201ENST00000404428 159 ntBASIC3.85□□□□□ -1.79
CBX1P83916 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.85□□□□□ -1.79
CBX1P83916 HMGB3P23-201ENST00000414981 585 ntBASIC3.85□□□□□ -1.79
CBX1P83916 AC093578.1-201ENST00000415219 368 ntBASIC3.85□□□□□ -1.79
CBX1P83916 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.85□□□□□ -1.79
CBX1P83916 TMSB10P2-201ENST00000416049 131 ntBASIC3.85□□□□□ -1.79
CBX1P83916 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.85□□□□□ -1.79
CBX1P83916 UQCRBP1-201ENST00000421129 336 ntBASIC3.85□□□□□ -1.79
CBX1P83916 OSTCP5-201ENST00000425293 453 ntBASIC3.85□□□□□ -1.79
CBX1P83916 BRWD1P3-201ENST00000428816 390 ntBASIC3.85□□□□□ -1.79
CBX1P83916 B3GNT2P1-201ENST00000434960 952 ntBASIC3.85□□□□□ -1.79
CBX1P83916 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CBX1P83916 AL500527.1-201ENST00000448532 255 ntBASIC3.85□□□□□ -1.79
CBX1P83916 OR9M1P-201ENST00000459641 921 ntBASIC3.85□□□□□ -1.79
CBX1P83916 RPL21P126-201ENST00000470049 478 ntBASIC3.85□□□□□ -1.79
CBX1P83916 AC073522.1-201ENST00000483312 377 ntBASIC3.85□□□□□ -1.79
CBX1P83916 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.85□□□□□ -1.79
CBX1P83916 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.85□□□□□ -1.79
CBX1P83916 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.85□□□□□ -1.79
CBX1P83916 AC133963.2-201ENST00000513686 578 ntBASIC3.85□□□□□ -1.79
CBX1P83916 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.85□□□□□ -1.79
CBX1P83916 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.85□□□□□ -1.79
CBX1P83916 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.85□□□□□ -1.79
CBX1P83916 AL359535.1-201ENST00000612100 1087 ntBASIC3.85□□□□□ -1.79
CBX1P83916 AP005019.3-201ENST00000620418 560 ntBASIC3.85□□□□□ -1.79
CBX1P83916 FAM157B-203ENST00000639350 358 ntBASIC3.85□□□□□ -1.79
CBX1P83916 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CBX1P83916 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.85□□□□□ -1.79
CBX1P83916 SEC63P2-201ENST00000503863 1939 ntBASIC3.85□□□□□ -1.79
CBX1P83916 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CBX1P83916 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.85□□□□□ -1.79
CBX1P83916 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
CBX1P83916 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CBX1P83916 NSRP1P1-201ENST00000444067 1693 ntBASIC3.84□□□□□ -1.79
CBX1P83916 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.79
CBX1P83916 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CBX1P83916 AL512646.1-201ENST00000269395 1077 ntBASIC3.84□□□□□ -1.79
CBX1P83916 RNA5SP383-201ENST00000362934 120 ntBASIC3.84□□□□□ -1.79
CBX1P83916 RNA5SP27-201ENST00000363839 119 ntBASIC3.84□□□□□ -1.79
CBX1P83916 SNORD113.2-201ENST00000364166 89 ntBASIC3.84□□□□□ -1.79
CBX1P83916 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.84□□□□□ -1.79
CBX1P83916 RNU6-356P-201ENST00000384140 107 ntBASIC3.84□□□□□ -1.79
CBX1P83916 RNU6-796P-201ENST00000391086 107 ntBASIC3.84□□□□□ -1.79
CBX1P83916 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.84□□□□□ -1.79
CBX1P83916 SDCBPP3-201ENST00000419629 891 ntBASIC3.84□□□□□ -1.79
CBX1P83916 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.84□□□□□ -1.79
CBX1P83916 ETF1P3-201ENST00000430422 1160 ntBASIC3.84□□□□□ -1.79
CBX1P83916 EIF2S2P2-201ENST00000447161 982 ntBASIC3.84□□□□□ -1.79
CBX1P83916 snoU13.7-201ENST00000459220 104 ntBASIC3.84□□□□□ -1.79
CBX1P83916 AC108860.1-201ENST00000484521 383 ntBASIC3.84□□□□□ -1.79
CBX1P83916 UBE2CP3-201ENST00000502715 450 ntBASIC3.84□□□□□ -1.79
CBX1P83916 KCTD9P5-201ENST00000504141 1170 ntBASIC3.84□□□□□ -1.79
CBX1P83916 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.84□□□□□ -1.79
CBX1P83916 RN7SKP277-201ENST00000516895 283 ntBASIC3.84□□□□□ -1.79
CBX1P83916 SNORA76.2-201ENST00000517095 137 ntBASIC3.84□□□□□ -1.79
CBX1P83916 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.84□□□□□ -1.79
CBX1P83916 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.84□□□□□ -1.79
CBX1P83916 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.84□□□□□ -1.79
CBX1P83916 MTND2P26-201ENST00000528255 1029 ntBASIC3.84□□□□□ -1.79
CBX1P83916 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.84□□□□□ -1.79
CBX1P83916 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.84□□□□□ -1.79
CBX1P83916 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.84□□□□□ -1.79
CBX1P83916 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.84□□□□□ -1.79
CBX1P83916 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.84□□□□□ -1.79
CBX1P83916 CENPUP2-201ENST00000555897 1186 ntBASIC3.84□□□□□ -1.79
CBX1P83916 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.84□□□□□ -1.79
CBX1P83916 MIR4480-201ENST00000582492 71 ntBASIC3.84□□□□□ -1.79
CBX1P83916 AF230666.2-201ENST00000602328 725 ntBASIC3.84□□□□□ -1.79
CBX1P83916 AC113403.1-201ENST00000604910 193 ntBASIC3.84□□□□□ -1.79
CBX1P83916 RNA5SP108-201ENST00000605921 117 ntBASIC3.84□□□□□ -1.79
CBX1P83916 AC019193.2-201ENST00000610012 634 ntBASIC3.84□□□□□ -1.79
CBX1P83916 Mico1.1-201ENST00000611698 204 ntBASIC3.84□□□□□ -1.79
CBX1P83916 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.84□□□□□ -1.79
CBX1P83916 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.84□□□□□ -1.79
CBX1P83916 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CBX1P83916 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CBX1P83916 AL021368.2-201ENST00000606125 5352 ntBASIC3.84□□□□□ -1.8
CBX1P83916 AC046144.1-201ENST00000478559 1853 ntBASIC3.84□□□□□ -1.8
CBX1P83916 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CBX1P83916 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CBX1P83916 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CBX1P83916 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms