Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL109741.2-201ENST00000455561 343 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 ZFRP1-201ENST00000457579 2970 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.75□□□□□ -1.81
CX3CL1P78423 RPS3AP22-201ENST00000488297 769 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 SCARNA22-201ENST00000503991 125 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AC119751.5-201ENST00000514077 770 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 HIGD1AP3-201ENST00000515857 278 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 MYL12AP1-201ENST00000518490 515 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.75□□□□□ -1.81
CX3CL1P78423 OR5AK1P-201ENST00000524837 922 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.75□□□□□ -1.81
CX3CL1P78423 OR4A45P-201ENST00000529954 901 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AC092470.1-201ENST00000546187 132 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.75□□□□□ -1.81
CX3CL1P78423 MIR4737-201ENST00000583979 81 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.75□□□□□ -1.81
CX3CL1P78423 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AC007566.2-201ENST00000603642 413 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AL133507.1-201ENST00000605269 557 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AC112220.3-201ENST00000605502 502 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.75□□□□□ -1.81
CX3CL1P78423 AL360219.1-201ENST00000610230 366 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AC005962.2-201ENST00000611427 652 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.75□□□□□ -1.81
CX3CL1P78423 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.75□□□□□ -1.81
CX3CL1P78423 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.75□□□□□ -1.81
CX3CL1P78423 ZNF37BP-203ENST00000452306 1352 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 MTND4P34-201ENST00000572715 1371 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AP000526.1-201ENST00000603308 1388 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CX3CL1P78423 AC015813.6-201ENST00000624409 5808 ntBASIC3.75□□□□□ -1.81
CX3CL1P78423 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CX3CL1P78423 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CX3CL1P78423 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
CX3CL1P78423 ZNF542P-204ENST00000482727 1305 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.74□□□□□ -1.81
CX3CL1P78423 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CL1P78423 AC022893.2-201ENST00000564832 3296 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CX3CL1P78423 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CX3CL1P78423 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CL1P78423 RNU6-931P-201ENST00000363850 107 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CL1P78423 ATP5F1P4-201ENST00000397288 746 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 RN7SKP100-201ENST00000411258 284 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 RSU1P3-201ENST00000412878 835 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CX3CL1P78423 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.74□□□□□ -1.81
CX3CL1P78423 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 P2RY10P2-201ENST00000416730 913 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AC011233.1-201ENST00000422812 283 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.74□□□□□ -1.81
CX3CL1P78423 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.74□□□□□ -1.81
CX3CL1P78423 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CL1P78423 ZNF33CP-201ENST00000432492 2030 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 MTCYBP34-201ENST00000439552 670 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.74□□□□□ -1.81
CX3CL1P78423 H2AFZP5-201ENST00000446960 382 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 RPL39P6-201ENST00000448289 150 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.74□□□□□ -1.81
CX3CL1P78423 ART2BP-201ENST00000453501 499 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AC079168.2-201ENST00000453977 416 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 NDUFA5P9-201ENST00000472609 340 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 RPL23AP65-201ENST00000475608 468 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.74□□□□□ -1.81
CX3CL1P78423 AC147055.4-201ENST00000504399 745 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 RNU6-583P-201ENST00000516012 92 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CL1P78423 AP001636.2-201ENST00000525517 696 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CL1P78423 OR5BC1P-201ENST00000529327 739 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.74□□□□□ -1.81
CX3CL1P78423 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CL1P78423 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.74□□□□□ -1.81
CX3CL1P78423 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.74□□□□□ -1.81
CX3CL1P78423 UBE2FP2-201ENST00000566646 462 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.74□□□□□ -1.81
CX3CL1P78423 AC002400.1-201ENST00000569310 726 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 LARP7P2-201ENST00000575306 125 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AC005412.1-201ENST00000580812 1049 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AP001180.3-201ENST00000582221 145 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CL1P78423 SLC25A36P1-201ENST00000590111 465 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.74□□□□□ -1.81
CX3CL1P78423 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CX3CL1P78423 AL391358.1-201ENST00000605342 190 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AC078899.5-201ENST00000612475 178 ntBASIC3.74□□□□□ -1.81
CX3CL1P78423 AL158196.1-201ENST00000616786 434 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms