Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC012414.6-201ENST00000568241 401 ntBASIC4.47□□□□□ -1.69
RAE1P78406 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.47□□□□□ -1.69
RAE1P78406 SNORD39.3-201ENST00000584451 71 ntBASIC4.47□□□□□ -1.69
RAE1P78406 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.47□□□□□ -1.69
RAE1P78406 AC090181.2-201ENST00000602975 672 ntBASIC4.47□□□□□ -1.69
RAE1P78406 AC128687.1-201ENST00000605304 619 ntBASIC4.47□□□□□ -1.69
RAE1P78406 AC133644.2-201ENST00000608142 540 ntBASIC4.47□□□□□ -1.69
RAE1P78406 SDR42E1P1-201ENST00000611327 477 ntBASIC4.47□□□□□ -1.69
RAE1P78406 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.47□□□□□ -1.69
RAE1P78406 AC243773.3-201ENST00000613270 256 ntBASIC4.47□□□□□ -1.69
RAE1P78406 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.47□□□□□ -1.69
RAE1P78406 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RAE1P78406 AC068870.2-201ENST00000620635 389 ntBASIC4.47□□□□□ -1.69
RAE1P78406 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.47□□□□□ -1.69
RAE1P78406 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.47□□□□□ -1.69
RAE1P78406 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RAE1P78406 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.47□□□□□ -1.69
RAE1P78406 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RAE1P78406 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.47□□□□□ -1.69
RAE1P78406 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RAE1P78406 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RAE1P78406 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RAE1P78406 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.46□□□□□ -1.69
RAE1P78406 CYP1D1P-201ENST00000416662 1433 ntBASIC4.46□□□□□ -1.69
RAE1P78406 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
RAE1P78406 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.46□□□□□ -1.69
RAE1P78406 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RAE1P78406 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
RAE1P78406 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
RAE1P78406 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RAE1P78406 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RAE1P78406 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RAE1P78406 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RAE1P78406 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RAE1P78406 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RAE1P78406 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RAE1P78406 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RAE1P78406 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RAE1P78406 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RAE1P78406 RNU6-462P-201ENST00000362659 105 ntBASIC4.46□□□□□ -1.7
RAE1P78406 RNU6-984P-201ENST00000363236 109 ntBASIC4.46□□□□□ -1.7
RAE1P78406 RNU4-91P-201ENST00000364778 135 ntBASIC4.46□□□□□ -1.7
RAE1P78406 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.46□□□□□ -1.7
RAE1P78406 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RAE1P78406 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RAE1P78406 RPL31P52-201ENST00000407532 367 ntBASIC4.46□□□□□ -1.7
RAE1P78406 RNA5SP296-201ENST00000410523 111 ntBASIC4.46□□□□□ -1.7
RAE1P78406 COX6B1P1-201ENST00000415962 213 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.46□□□□□ -1.7
RAE1P78406 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.46□□□□□ -1.7
RAE1P78406 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.46□□□□□ -1.7
RAE1P78406 MTND4P6-201ENST00000438297 472 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.46□□□□□ -1.7
RAE1P78406 AC239809.1-201ENST00000450470 217 ntBASIC4.46□□□□□ -1.7
RAE1P78406 SNRPGP9-201ENST00000456025 225 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC097493.1-201ENST00000463958 372 ntBASIC4.46□□□□□ -1.7
RAE1P78406 RPL30P9-201ENST00000465586 330 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AP000893.1-201ENST00000474462 794 ntBASIC4.46□□□□□ -1.7
RAE1P78406 RPL30P11-201ENST00000495304 339 ntBASIC4.46□□□□□ -1.7
RAE1P78406 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.46□□□□□ -1.7
RAE1P78406 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
RAE1P78406 OR5M14P-201ENST00000506803 618 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.46□□□□□ -1.7
RAE1P78406 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RAE1P78406 RNA5SP464-201ENST00000516251 108 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.46□□□□□ -1.7
RAE1P78406 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
RAE1P78406 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.46□□□□□ -1.7
RAE1P78406 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.46□□□□□ -1.7
RAE1P78406 AP002963.1-201ENST00000530590 184 ntBASIC4.46□□□□□ -1.7
RAE1P78406 CYCSP28-201ENST00000534284 321 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.46□□□□□ -1.7
RAE1P78406 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.46□□□□□ -1.7
RAE1P78406 PSMB7P1-201ENST00000556349 514 ntBASIC4.46□□□□□ -1.7
RAE1P78406 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.46□□□□□ -1.7
RAE1P78406 BGLT3-201ENST00000564523 994 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC018552.3-201ENST00000567416 561 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AP001004.1-201ENST00000582468 324 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC110743.1-201ENST00000584870 478 ntBASIC4.46□□□□□ -1.7
RAE1P78406 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.46□□□□□ -1.7
RAE1P78406 AC022146.1-201ENST00000595307 847 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC068790.6-201ENST00000602558 258 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.46□□□□□ -1.7
RAE1P78406 AC080078.2-201ENST00000603766 501 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.46□□□□□ -1.7
RAE1P78406 AL121873.1-201ENST00000616013 524 ntBASIC4.46□□□□□ -1.7
RAE1P78406 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RAE1P78406 AL590240.3-201ENST00000621416 943 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC005086.4-201ENST00000623065 213 ntBASIC4.46□□□□□ -1.7
RAE1P78406 AC231657.1-201ENST00000624313 397 ntBASIC4.46□□□□□ -1.7
RAE1P78406 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.46□□□□□ -1.7
RAE1P78406 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.46□□□□□ -1.7
RAE1P78406 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.46□□□□□ -1.7
RAE1P78406 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RAE1P78406 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
RAE1P78406 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.46□□□□□ -1.7
RAE1P78406 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RAE1P78406 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.46□□□□□ -1.7
RAE1P78406 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RAE1P78406 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms