Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.65
CLRN1P58418 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CLRN1P58418 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.71□□□□□ -1.65
CLRN1P58418 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
CLRN1P58418 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.71□□□□□ -1.65
CLRN1P58418 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 AC023421.1-201ENST00000590535 1785 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CLRN1P58418 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.71□□□□□ -1.66
CLRN1P58418 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.71□□□□□ -1.66
CLRN1P58418 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 AL034549.2-201ENST00000618285 3373 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLRN1P58418 RNA5SP242-201ENST00000364171 118 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 RNA5SP223-201ENST00000365174 120 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 MTCO3P40-201ENST00000392516 676 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AC016769.3-201ENST00000396562 315 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 OR4K12P-201ENST00000406538 961 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 RPS3AP24-201ENST00000407896 734 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 NPM1P4-201ENST00000414095 812 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.71□□□□□ -1.66
CLRN1P58418 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 MTCO2P19-201ENST00000427513 598 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 AL121601.2-201ENST00000438019 707 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 AL512326.1-201ENST00000443050 721 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 RPL36AP15-201ENST00000444514 266 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 NFU1P2-201ENST00000448700 469 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 BX322784.1-201ENST00000455793 1077 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AC023141.9-201ENST00000458734 412 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AL133445.1-201ENST00000467051 452 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 RN7SL189P-201ENST00000468631 289 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AP000893.1-201ENST00000474462 794 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AL049874.2-201ENST00000492636 288 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AL136038.1-201ENST00000497246 351 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.71□□□□□ -1.66
CLRN1P58418 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.71□□□□□ -1.66
CLRN1P58418 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 AC074344.1-201ENST00000512823 224 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AC010342.1-201ENST00000514047 877 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 RPS27AP18-201ENST00000515536 459 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 COX6CP8-201ENST00000522620 226 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 LSM6P2-201ENST00000552208 177 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.71□□□□□ -1.66
CLRN1P58418 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.71□□□□□ -1.66
CLRN1P58418 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.71□□□□□ -1.66
CLRN1P58418 SNORD95-201ENST00000579879 68 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 MIR4310-201ENST00000582950 57 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.71□□□□□ -1.66
CLRN1P58418 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.71□□□□□ -1.66
CLRN1P58418 AC099654.14-201ENST00000638599 341 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 AC097461.1-201ENST00000568928 2821 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.71□□□□□ -1.66
CLRN1P58418 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 AC010266.2-201ENST00000564741 3255 ntBASIC4.71□□□□□ -1.66
CLRN1P58418 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLRN1P58418 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CLRN1P58418 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLRN1P58418 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLRN1P58418 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLRN1P58418 SMG1P4-204ENST00000523028 4131 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 AC019072.1-201ENST00000604535 1551 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLRN1P58418 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CLRN1P58418 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLRN1P58418 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLRN1P58418 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLRN1P58418 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLRN1P58418 OR4K15-201ENST00000305051 1216 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLRN1P58418 RN7SKP81-201ENST00000365603 331 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 RNU6-1293P-201ENST00000384077 107 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLRN1P58418 CALM2P3-201ENST00000400429 449 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 SNORA11.3-201ENST00000408471 128 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 RNU6-195P-201ENST00000411352 109 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 SPA17P1-201ENST00000416656 452 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 MTCYBP24-201ENST00000420387 1106 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 AC069157.1-201ENST00000421749 137 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms