Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AP005229.2-201ENST00000609980 697 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.6□□□□□ -1.83
LIM2P55344 MIR6798-201ENST00000612887 67 ntBASIC3.6□□□□□ -1.83
LIM2P55344 AC018926.3-201ENST00000618841 406 ntBASIC3.6□□□□□ -1.83
LIM2P55344 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.6□□□□□ -1.83
LIM2P55344 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LIM2P55344 AC074029.4-201ENST00000624796 1859 ntBASIC3.6□□□□□ -1.83
LIM2P55344 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LIM2P55344 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
LIM2P55344 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
LIM2P55344 AC073055.1-201ENST00000456901 1621 ntBASIC3.59□□□□□ -1.83
LIM2P55344 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LIM2P55344 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
LIM2P55344 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LIM2P55344 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LIM2P55344 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.83
LIM2P55344 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LIM2P55344 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LIM2P55344 RNU6-932P-201ENST00000391108 106 ntBASIC3.59□□□□□ -1.83
LIM2P55344 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LIM2P55344 SNORA11C-201ENST00000408532 129 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.59□□□□□ -1.83
LIM2P55344 AL445183.3-201ENST00000414168 502 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.59□□□□□ -1.83
LIM2P55344 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.59□□□□□ -1.83
LIM2P55344 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.59□□□□□ -1.83
LIM2P55344 MTCO2P1-201ENST00000424648 477 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.59□□□□□ -1.83
LIM2P55344 IPMKP1-201ENST00000425988 855 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.59□□□□□ -1.83
LIM2P55344 SNORA71B-202ENST00000439232 272 ntBASIC3.59□□□□□ -1.83
LIM2P55344 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.59□□□□□ -1.83
LIM2P55344 AL096803.2-201ENST00000450032 677 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC098824.1-201ENST00000453565 980 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC015908.1-201ENST00000478739 476 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.59□□□□□ -1.83
LIM2P55344 AC011037.1-201ENST00000483964 558 ntBASIC3.59□□□□□ -1.83
LIM2P55344 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.59□□□□□ -1.83
LIM2P55344 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.59□□□□□ -1.83
LIM2P55344 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.59□□□□□ -1.83
LIM2P55344 VWA8P1-201ENST00000510889 176 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.59□□□□□ -1.83
LIM2P55344 RNU5A-7P-201ENST00000515979 116 ntBASIC3.59□□□□□ -1.83
LIM2P55344 HMGB1P1-201ENST00000522557 636 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC124293.1-201ENST00000530034 493 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.59□□□□□ -1.83
LIM2P55344 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.59□□□□□ -1.83
LIM2P55344 AL133457.1-201ENST00000564251 987 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.59□□□□□ -1.83
LIM2P55344 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.59□□□□□ -1.83
LIM2P55344 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.59□□□□□ -1.83
LIM2P55344 BRDTP1-201ENST00000605735 677 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC099669.2-201ENST00000616549 437 ntBASIC3.59□□□□□ -1.83
LIM2P55344 LINC00901.1-201ENST00000617252 152 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC079684.1-201ENST00000621405 437 ntBASIC3.59□□□□□ -1.83
LIM2P55344 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.59□□□□□ -1.83
LIM2P55344 AC067931.1-201ENST00000624190 671 ntBASIC3.59□□□□□ -1.83
LIM2P55344 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.59□□□□□ -1.83
LIM2P55344 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.59□□□□□ -1.83
LIM2P55344 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.59□□□□□ -1.83
LIM2P55344 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LIM2P55344 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LIM2P55344 AL627171.1-201ENST00000618845 1308 ntBASIC3.59□□□□□ -1.83
LIM2P55344 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.59□□□□□ -1.83
LIM2P55344 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
LIM2P55344 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LIM2P55344 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.84
LIM2P55344 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LIM2P55344 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LIM2P55344 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.58□□□□□ -1.84
LIM2P55344 AC006504.1-201ENST00000562493 3666 ntBASIC3.58□□□□□ -1.84
LIM2P55344 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.58□□□□□ -1.84
LIM2P55344 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIM2P55344 RNU6-984P-201ENST00000363236 109 ntBASIC3.58□□□□□ -1.84
LIM2P55344 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.58□□□□□ -1.84
LIM2P55344 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIM2P55344 AL035405.1-201ENST00000400795 710 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AC004022.2-201ENST00000413824 193 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.58□□□□□ -1.84
LIM2P55344 RPL21P109-201ENST00000422213 475 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AC241520.1-201ENST00000422654 1099 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.58□□□□□ -1.84
LIM2P55344 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.58□□□□□ -1.84
LIM2P55344 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.58□□□□□ -1.84
LIM2P55344 ELOCP11-201ENST00000436690 332 ntBASIC3.58□□□□□ -1.84
LIM2P55344 RPL21P133-201ENST00000443666 476 ntBASIC3.58□□□□□ -1.84
LIM2P55344 ELOCP16-201ENST00000444494 332 ntBASIC3.58□□□□□ -1.84
LIM2P55344 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.58□□□□□ -1.84
LIM2P55344 BX248409.1-201ENST00000455497 255 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.58□□□□□ -1.84
LIM2P55344 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.58□□□□□ -1.84
LIM2P55344 AL049829.1-201ENST00000465411 156 ntBASIC3.58□□□□□ -1.84
LIM2P55344 AC092902.1-201ENST00000486999 259 ntBASIC3.58□□□□□ -1.84
LIM2P55344 TRBV12-2-201ENST00000489763 344 ntBASIC3.58□□□□□ -1.84
LIM2P55344 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIM2P55344 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.58□□□□□ -1.84
LIM2P55344 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.58□□□□□ -1.84
LIM2P55344 AC093853.1-201ENST00000515689 483 ntBASIC3.58□□□□□ -1.84
LIM2P55344 RNA5SP208-201ENST00000516156 78 ntBASIC3.58□□□□□ -1.84
LIM2P55344 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms