Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS2P54868 RNU6-1102P-201ENST00000516149 96 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 AC103833.1-201ENST00000517442 172 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 MTCYBP19-201ENST00000517463 1124 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 SMARCE1P4-201ENST00000523647 241 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGCS2P54868 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGCS2P54868 NOP56P3-201ENST00000549457 385 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGCS2P54868 AC106782.4-201ENST00000568264 210 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 AC005776.1-201ENST00000603164 290 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 AC135178.6-201ENST00000605314 398 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 AC092953.2-201ENST00000608000 699 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS2P54868 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS2P54868 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS2P54868 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGCS2P54868 BMS1P21-201ENST00000634565 365 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 ZNF833P-201ENST00000424938 1494 ntBASIC4.15□□□□□ -1.75
HMGCS2P54868 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS2P54868 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS2P54868 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGCS2P54868 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS2P54868 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS2P54868 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS2P54868 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS2P54868 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.14□□□□□ -1.75
HMGCS2P54868 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HMGCS2P54868 MIR128-1-201ENST00000384921 82 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 GSTA12P-201ENST00000402398 508 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 PTGES3P2-201ENST00000407942 482 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 BX323014.1-201ENST00000412876 237 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 OR4K6P-201ENST00000416478 897 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 OR1AA1P-201ENST00000419597 916 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGCS2P54868 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGCS2P54868 AC007000.2-201ENST00000442564 487 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGCS2P54868 MTND2P6-201ENST00000455337 1030 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 RPL5P13-201ENST00000462840 709 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGCS2P54868 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGCS2P54868 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.14□□□□□ -1.75
HMGCS2P54868 CR383656.14-201ENST00000551951 406 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGCS2P54868 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGCS2P54868 PSMA6P4-201ENST00000603247 718 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 KATNBL1P5-201ENST00000605015 517 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 AL732618.1-201ENST00000623251 301 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 AC080188.3-201ENST00000624842 748 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 AL138960.2-201ENST00000625145 535 ntBASIC4.14□□□□□ -1.75
HMGCS2P54868 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGCS2P54868 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGCS2P54868 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS2P54868 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS2P54868 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS2P54868 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS2P54868 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS2P54868 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HMGCS2P54868 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HMGCS2P54868 RNA5SP306-201ENST00000411087 107 ntBASIC4.13□□□□□ -1.75
HMGCS2P54868 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGCS2P54868 ARL2BPP3-201ENST00000421226 480 ntBASIC4.13□□□□□ -1.75
HMGCS2P54868 RPF2P1-201ENST00000424137 906 ntBASIC4.13□□□□□ -1.75
HMGCS2P54868 AC099563.1-201ENST00000456086 418 ntBASIC4.13□□□□□ -1.75
HMGCS2P54868 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.13□□□□□ -1.75
HMGCS2P54868 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGCS2P54868 AC027338.1-201ENST00000514840 825 ntBASIC4.13□□□□□ -1.75
HMGCS2P54868 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGCS2P54868 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.13□□□□□ -1.75
HMGCS2P54868 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGCS2P54868 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGCS2P54868 AC005242.1-201ENST00000585658 438 ntBASIC4.13□□□□□ -1.75
HMGCS2P54868 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.13□□□□□ -1.75
HMGCS2P54868 AC010200.2-201ENST00000605098 235 ntBASIC4.13□□□□□ -1.75
HMGCS2P54868 AL353600.1-201ENST00000608148 251 ntBASIC4.13□□□□□ -1.75
HMGCS2P54868 AL445493.3-201ENST00000619568 477 ntBASIC4.13□□□□□ -1.75
HMGCS2P54868 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.13□□□□□ -1.75
HMGCS2P54868 RPL23AP61-201ENST00000623642 466 ntBASIC4.13□□□□□ -1.75
HMGCS2P54868 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS2P54868 AC007656.2-201ENST00000624902 4547 ntBASIC4.13□□□□□ -1.75
HMGCS2P54868 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HMGCS2P54868 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS2P54868 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGCS2P54868 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HMGCS2P54868 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms