Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC1P51610 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.56□□□□□ -1.84
HCFC1P51610 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC1P51610 AC006042.3-201ENST00000454684 1469 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
HCFC1P51610 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC1P51610 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.56□□□□□ -1.84
HCFC1P51610 NACA3P-201ENST00000359690 648 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 RHOT1P2-201ENST00000366423 333 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 RNU4-6P-201ENST00000410804 122 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 AC105402.1-201ENST00000413336 545 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 AL356320.2-201ENST00000417263 507 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 AC010099.3-201ENST00000423896 409 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 RPL23AP25-201ENST00000430973 463 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 AC092170.1-201ENST00000440211 356 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 ARL4AP3-201ENST00000441452 574 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 PPIAP15-201ENST00000479662 484 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 GAPDHP36-201ENST00000480688 918 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 RN7SL809P-201ENST00000482040 297 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 AC012158.1-204ENST00000483430 465 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.56□□□□□ -1.84
HCFC1P51610 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 AF186190.1-201ENST00000517470 480 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 IGLV3-26-201ENST00000520756 302 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 AC023813.2-201ENST00000564321 469 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.56□□□□□ -1.84
HCFC1P51610 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.56□□□□□ -1.84
HCFC1P51610 AC091057.2-201ENST00000602594 792 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 AL592436.1-201ENST00000605135 558 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 AC007349.4-201ENST00000608114 532 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 AL138478.1-201ENST00000612252 832 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.56□□□□□ -1.84
HCFC1P51610 AC123767.1-202ENST00000620407 817 ntBASIC3.56□□□□□ -1.84
HCFC1P51610 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.56□□□□□ -1.84
HCFC1P51610 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC1P51610 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC1P51610 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC1P51610 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCFC1P51610 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
HCFC1P51610 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
HCFC1P51610 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.55□□□□□ -1.84
HCFC1P51610 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.55□□□□□ -1.84
HCFC1P51610 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.55□□□□□ -1.84
HCFC1P51610 MIR7-3-201ENST00000384898 110 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
HCFC1P51610 AL136131.1-201ENST00000406079 803 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 AC073136.2-201ENST00000417282 849 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.55□□□□□ -1.84
HCFC1P51610 PDSS1P1-201ENST00000422953 1114 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.55□□□□□ -1.84
HCFC1P51610 RPS3AP12-201ENST00000443616 753 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 RPL7P1-201ENST00000468161 747 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 RPL7P9-201ENST00000468715 747 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC1P51610 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.55□□□□□ -1.84
HCFC1P51610 AC010627.1-201ENST00000503819 1294 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 RNA5SP497-201ENST00000516081 97 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.55□□□□□ -1.84
HCFC1P51610 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.55□□□□□ -1.84
HCFC1P51610 AC006064.5-201ENST00000541782 248 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 MTND6P33-201ENST00000571794 183 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 PCNAP1-202ENST00000595299 752 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 VN1R78P-201ENST00000597393 564 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 AC231759.1-201ENST00000616455 597 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 AP000484.1-201ENST00000620067 1252 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 AC067931.1-201ENST00000624190 671 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 AC104446.1-201ENST00000613728 1321 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HCFC1P51610 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC1P51610 AC046144.1-201ENST00000478559 1853 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 GTF2H2B-203ENST00000508065 1432 ntBASIC3.55□□□□□ -1.84
HCFC1P51610 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.55□□□□□ -1.84
HCFC1P51610 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
HCFC1P51610 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC1P51610 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC1P51610 RNU1-87P-201ENST00000363727 170 ntBASIC3.54□□□□□ -1.84
HCFC1P51610 Y_RNA.333-201ENST00000365274 102 ntBASIC3.54□□□□□ -1.84
HCFC1P51610 RNU6-244P-201ENST00000391028 104 ntBASIC3.54□□□□□ -1.84
HCFC1P51610 SNORD66.1-201ENST00000391230 76 ntBASIC3.54□□□□□ -1.84
HCFC1P51610 RPL21P17-201ENST00000397467 475 ntBASIC3.54□□□□□ -1.84
HCFC1P51610 SFR1P1-201ENST00000403720 688 ntBASIC3.54□□□□□ -1.84
HCFC1P51610 RNU6-77P-201ENST00000410554 91 ntBASIC3.54□□□□□ -1.84
HCFC1P51610 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.54□□□□□ -1.84
HCFC1P51610 AC008280.1-201ENST00000418851 412 ntBASIC3.54□□□□□ -1.84
HCFC1P51610 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.54□□□□□ -1.84
HCFC1P51610 EXTL2P1-201ENST00000446218 416 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms