Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
SMARCA2P51531 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SMARCA2P51531 AP003485.2-201ENST00000623636 610 ntBASIC5.81□□□□□ -1.48
SMARCA2P51531 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.81□□□□□ -1.48
SMARCA2P51531 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SMARCA2P51531 OR5BR1P-201ENST00000524992 1330 ntBASIC5.81□□□□□ -1.48
SMARCA2P51531 TTC39DP-201ENST00000416781 1688 ntBASIC5.81□□□□□ -1.48
SMARCA2P51531 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.81□□□□□ -1.48
SMARCA2P51531 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SMARCA2P51531 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SMARCA2P51531 HMGN2P8-201ENST00000391458 268 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA2P51531 RPL23AP82-202ENST00000427528 469 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.8□□□□□ -1.48
SMARCA2P51531 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA2P51531 CENPBD1P1-201ENST00000464061 469 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA2P51531 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.8□□□□□ -1.48
SMARCA2P51531 AL360157.1-201ENST00000565962 87 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA2P51531 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC5.8□□□□□ -1.48
SMARCA2P51531 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SMARCA2P51531 AL645568.2-201ENST00000432815 1337 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA2P51531 AC073073.2-201ENST00000609827 2578 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA2P51531 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA2P51531 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA2P51531 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA2P51531 AL356489.2-201ENST00000566968 3528 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA2P51531 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA2P51531 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA2P51531 AL589765.3-201ENST00000446084 462 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 NPM1P13-201ENST00000452663 865 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 MIR4769-201ENST00000584126 77 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 AL162713.1-201ENST00000604480 262 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.8□□□□□ -1.48
SMARCA2P51531 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA2P51531 AL356321.1-201ENST00000621360 228 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 IGHVIII-44-202ENST00000636235 289 ntBASIC5.8□□□□□ -1.48
SMARCA2P51531 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.79□□□□□ -1.48
SMARCA2P51531 RIOK3P1-201ENST00000418778 1528 ntBASIC5.79□□□□□ -1.48
SMARCA2P51531 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.79□□□□□ -1.48
SMARCA2P51531 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC5.79□□□□□ -1.48
SMARCA2P51531 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SMARCA2P51531 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SMARCA2P51531 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.79□□□□□ -1.48
SMARCA2P51531 AL035407.1-201ENST00000429211 571 ntBASIC5.79□□□□□ -1.48
SMARCA2P51531 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC5.79□□□□□ -1.48
SMARCA2P51531 RN7SL432P-201ENST00000484057 298 ntBASIC5.79□□□□□ -1.48
SMARCA2P51531 RPS3AP50-201ENST00000487064 803 ntBASIC5.79□□□□□ -1.48
SMARCA2P51531 YWHAEP4-201ENST00000505390 198 ntBASIC5.79□□□□□ -1.48
SMARCA2P51531 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.79□□□□□ -1.48
SMARCA2P51531 AL162574.2-201ENST00000614618 657 ntBASIC5.79□□□□□ -1.48
SMARCA2P51531 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC5.79□□□□□ -1.48
SMARCA2P51531 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SMARCA2P51531 AF117829.1-206ENST00000621883 3802 ntBASIC5.79□□□□□ -1.48
SMARCA2P51531 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
SMARCA2P51531 AL672296.1-201ENST00000427780 2158 ntBASIC5.78□□□□□ -1.48
SMARCA2P51531 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SMARCA2P51531 OR5J1P-201ENST00000313544 939 ntBASIC5.78□□□□□ -1.48
SMARCA2P51531 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SMARCA2P51531 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.78□□□□□ -1.48
SMARCA2P51531 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SMARCA2P51531 AC012065.2-201ENST00000421295 375 ntBASIC5.78□□□□□ -1.48
SMARCA2P51531 NANOGP6-201ENST00000429190 847 ntBASIC5.78□□□□□ -1.48
SMARCA2P51531 THAP12P8-201ENST00000447914 2115 ntBASIC5.78□□□□□ -1.48
SMARCA2P51531 SLC31A1P1-201ENST00000451221 567 ntBASIC5.78□□□□□ -1.48
SMARCA2P51531 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC5.78□□□□□ -1.48
SMARCA2P51531 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SMARCA2P51531 AC068724.1-201ENST00000487100 792 ntBASIC5.78□□□□□ -1.48
SMARCA2P51531 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
SMARCA2P51531 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.78□□□□□ -1.48
SMARCA2P51531 H3F3AP1-201ENST00000559984 334 ntBASIC5.78□□□□□ -1.48
SMARCA2P51531 UBL5P2-201ENST00000583788 219 ntBASIC5.78□□□□□ -1.48
SMARCA2P51531 AC112503.1-201ENST00000608436 391 ntBASIC5.78□□□□□ -1.48
SMARCA2P51531 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.78□□□□□ -1.48
SMARCA2P51531 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.77□□□□□ -1.48
SMARCA2P51531 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.77□□□□□ -1.49
SMARCA2P51531 ZYG11AP1-201ENST00000430329 837 ntBASIC5.77□□□□□ -1.49
SMARCA2P51531 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.77□□□□□ -1.49
SMARCA2P51531 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.77□□□□□ -1.49
SMARCA2P51531 HNRNPKP5-201ENST00000515300 253 ntBASIC5.77□□□□□ -1.49
SMARCA2P51531 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.77□□□□□ -1.49
SMARCA2P51531 MIR4319-201ENST00000577285 85 ntBASIC5.77□□□□□ -1.49
SMARCA2P51531 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA2P51531 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC5.77□□□□□ -1.49
SMARCA2P51531 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.77□□□□□ -1.49
SMARCA2P51531 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SMARCA2P51531 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SMARCA2P51531 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SMARCA2P51531 AL031679.1-201ENST00000400616 525 ntBASIC5.76□□□□□ -1.49
SMARCA2P51531 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SMARCA2P51531 NUP35P1-201ENST00000422734 947 ntBASIC5.76□□□□□ -1.49
SMARCA2P51531 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.76□□□□□ -1.49
SMARCA2P51531 AL135938.1-201ENST00000443141 297 ntBASIC5.76□□□□□ -1.49
SMARCA2P51531 AL359535.1-201ENST00000612100 1087 ntBASIC5.76□□□□□ -1.49
SMARCA2P51531 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
SMARCA2P51531 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms