Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.48□□□□□ -1.85
CENPFP49454 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.48□□□□□ -1.85
CENPFP49454 PPP1R11P1-201ENST00000486095 376 ntBASIC3.48□□□□□ -1.85
CENPFP49454 RPS29P21-201ENST00000496272 170 ntBASIC3.48□□□□□ -1.85
CENPFP49454 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CENPFP49454 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
CENPFP49454 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.48□□□□□ -1.85
CENPFP49454 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CENPFP49454 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.48□□□□□ -1.85
CENPFP49454 RNU1-108P-201ENST00000362556 161 ntBASIC3.48□□□□□ -1.85
CENPFP49454 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.48□□□□□ -1.85
CENPFP49454 RPS4XP6-201ENST00000477670 797 ntBASIC3.48□□□□□ -1.85
CENPFP49454 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC3.48□□□□□ -1.85
CENPFP49454 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CENPFP49454 AL353600.1-201ENST00000608148 251 ntBASIC3.48□□□□□ -1.85
CENPFP49454 MIR622-201ENST00000638396 96 ntBASIC3.48□□□□□ -1.85
CENPFP49454 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CENPFP49454 DCAF13P3-201ENST00000561147 1334 ntBASIC3.48□□□□□ -1.85
CENPFP49454 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CENPFP49454 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.48□□□□□ -1.85
CENPFP49454 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.48□□□□□ -1.85
CENPFP49454 AL592148.1-201ENST00000413568 445 ntBASIC3.48□□□□□ -1.85
CENPFP49454 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CENPFP49454 TRGV5P-201ENST00000419915 354 ntBASIC3.48□□□□□ -1.85
CENPFP49454 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
CENPFP49454 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CENPFP49454 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.48□□□□□ -1.85
CENPFP49454 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.48□□□□□ -1.85
CENPFP49454 MAPK10-286ENST00000641208 8747 ntBASIC3.48□□□□□ -1.85
CENPFP49454 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.47□□□□□ -1.85
CENPFP49454 AL022322.2-201ENST00000624072 20397 ntBASIC3.47□□□□□ -1.85
CENPFP49454 AL049780.3-201ENST00000624612 1583 ntBASIC3.47□□□□□ -1.85
CENPFP49454 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
CENPFP49454 LINC02471-203ENST00000641941 4752 ntBASIC3.47□□□□□ -1.85
CENPFP49454 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CENPFP49454 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CENPFP49454 FAM133CP-201ENST00000332869 704 ntBASIC3.47□□□□□ -1.85
CENPFP49454 MIR9-1-201ENST00000385198 89 ntBASIC3.47□□□□□ -1.85
CENPFP49454 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CENPFP49454 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.47□□□□□ -1.85
CENPFP49454 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.47□□□□□ -1.85
CENPFP49454 RPS20P22-201ENST00000473700 357 ntBASIC3.47□□□□□ -1.85
CENPFP49454 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.47□□□□□ -1.85
CENPFP49454 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CENPFP49454 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.47□□□□□ -1.85
CENPFP49454 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.47□□□□□ -1.85
CENPFP49454 RAP1BP1-201ENST00000412709 553 ntBASIC3.47□□□□□ -1.85
CENPFP49454 EIF4EP1-201ENST00000422311 642 ntBASIC3.47□□□□□ -1.85
CENPFP49454 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.47□□□□□ -1.85
CENPFP49454 AL031736.2-201ENST00000426573 787 ntBASIC3.47□□□□□ -1.85
CENPFP49454 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.47□□□□□ -1.85
CENPFP49454 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.47□□□□□ -1.85
CENPFP49454 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.47□□□□□ -1.85
CENPFP49454 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.47□□□□□ -1.85
CENPFP49454 AC017037.2-201ENST00000513850 890 ntBASIC3.47□□□□□ -1.85
CENPFP49454 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
CENPFP49454 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.47□□□□□ -1.85
CENPFP49454 AC079600.2-201ENST00000550076 130 ntBASIC3.47□□□□□ -1.85
CENPFP49454 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CENPFP49454 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.47□□□□□ -1.85
CENPFP49454 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CENPFP49454 NAMPTP1-201ENST00000440465 2514 ntBASIC3.47□□□□□ -1.85
CENPFP49454 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC3.47□□□□□ -1.85
CENPFP49454 AC046144.1-201ENST00000478559 1853 ntBASIC3.47□□□□□ -1.85
CENPFP49454 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC3.47□□□□□ -1.85
CENPFP49454 NCOA4P2-201ENST00000340589 1813 ntBASIC3.46□□□□□ -1.85
CENPFP49454 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC3.46□□□□□ -1.85
CENPFP49454 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CENPFP49454 AC008549.1-201ENST00000512900 643 ntBASIC3.46□□□□□ -1.86
CENPFP49454 EEF1A1P37-201ENST00000522748 715 ntBASIC3.46□□□□□ -1.86
CENPFP49454 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.46□□□□□ -1.86
CENPFP49454 BNIP3P8-201ENST00000597863 560 ntBASIC3.46□□□□□ -1.86
CENPFP49454 AC098826.3-201ENST00000603823 466 ntBASIC3.46□□□□□ -1.86
CENPFP49454 AC083843.3-201ENST00000623679 2186 ntBASIC3.46□□□□□ -1.86
CENPFP49454 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
CENPFP49454 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CENPFP49454 AC017002.4-201ENST00000604721 1525 ntBASIC3.46□□□□□ -1.86
CENPFP49454 AC063976.3-201ENST00000426849 329 ntBASIC3.46□□□□□ -1.86
CENPFP49454 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.46□□□□□ -1.86
CENPFP49454 RPS24P13-201ENST00000442520 397 ntBASIC3.46□□□□□ -1.86
CENPFP49454 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.46□□□□□ -1.86
CENPFP49454 AC022149.2-201ENST00000621061 203 ntBASIC3.46□□□□□ -1.86
CENPFP49454 ASNSP1-201ENST00000518311 1939 ntBASIC3.46□□□□□ -1.86
CENPFP49454 AP000641.1-201ENST00000531988 1639 ntBASIC3.46□□□□□ -1.86
CENPFP49454 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CENPFP49454 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CENPFP49454 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CENPFP49454 MIR512-1-201ENST00000384913 84 ntBASIC3.46□□□□□ -1.86
CENPFP49454 RNA5SP184-201ENST00000411071 108 ntBASIC3.46□□□□□ -1.86
CENPFP49454 HMGB3P22-202ENST00000451823 572 ntBASIC3.46□□□□□ -1.86
CENPFP49454 NECAP1P2-201ENST00000455668 727 ntBASIC3.46□□□□□ -1.86
CENPFP49454 SNORD109B-201ENST00000458961 67 ntBASIC3.46□□□□□ -1.86
CENPFP49454 SNORD109A-201ENST00000459128 67 ntBASIC3.46□□□□□ -1.86
CENPFP49454 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.46□□□□□ -1.86
CENPFP49454 DEFB122-202ENST00000569013 197 ntBASIC3.46□□□□□ -1.86
CENPFP49454 AC024153.1-201ENST00000603103 365 ntBASIC3.46□□□□□ -1.86
CENPFP49454 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CENPFP49454 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CENPFP49454 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.45□□□□□ -1.86
CENPFP49454 GNG5P5-201ENST00000420444 220 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms