Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN4AP35499 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN4AP35499 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.01□□□□□ -1.77
SCN4AP35499 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN4AP35499 NDUFB9P3-201ENST00000521269 501 ntBASIC4.01□□□□□ -1.77
SCN4AP35499 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.01□□□□□ -1.77
SCN4AP35499 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN4AP35499 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCN4AP35499 AC141257.3-201ENST00000572906 215 ntBASIC4.01□□□□□ -1.77
SCN4AP35499 AC067852.3-201ENST00000589177 561 ntBASIC4.01□□□□□ -1.77
SCN4AP35499 KC877982.1-201ENST00000602313 470 ntBASIC4.01□□□□□ -1.77
SCN4AP35499 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.01□□□□□ -1.77
SCN4AP35499 OR4G1P-202ENST00000641173 1788 ntBASIC4.01□□□□□ -1.77
SCN4AP35499 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN4AP35499 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN4AP35499 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN4AP35499 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SCN4AP35499 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4□□□□□ -1.77
SCN4AP35499 RNA5SP235-201ENST00000365411 114 ntBASIC4□□□□□ -1.77
SCN4AP35499 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4□□□□□ -1.77
SCN4AP35499 RN7SL594P-201ENST00000470590 287 ntBASIC4□□□□□ -1.77
SCN4AP35499 AC069499.1-201ENST00000489433 509 ntBASIC4□□□□□ -1.77
SCN4AP35499 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4□□□□□ -1.77
SCN4AP35499 GTF3AP2-201ENST00000557014 266 ntBASIC4□□□□□ -1.77
SCN4AP35499 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4□□□□□ -1.77
SCN4AP35499 AC006557.5-201ENST00000603126 811 ntBASIC4□□□□□ -1.77
SCN4AP35499 AC105227.2-201ENST00000615075 605 ntBASIC4□□□□□ -1.77
SCN4AP35499 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN4AP35499 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4□□□□□ -1.77
SCN4AP35499 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
SCN4AP35499 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4□□□□□ -1.77
SCN4AP35499 SNORA54-201ENST00000384281 123 ntBASIC4□□□□□ -1.77
SCN4AP35499 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4□□□□□ -1.77
SCN4AP35499 AL139281.1-201ENST00000422120 335 ntBASIC4□□□□□ -1.77
SCN4AP35499 OR6K4P-201ENST00000423179 955 ntBASIC4□□□□□ -1.77
SCN4AP35499 AC105272.1-201ENST00000438604 198 ntBASIC4□□□□□ -1.77
SCN4AP35499 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN4AP35499 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
SCN4AP35499 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4□□□□□ -1.77
SCN4AP35499 AC092868.3-201ENST00000560515 784 ntBASIC4□□□□□ -1.77
SCN4AP35499 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4□□□□□ -1.77
SCN4AP35499 AC103881.1-201ENST00000603476 538 ntBASIC4□□□□□ -1.77
SCN4AP35499 OR2AS2P-201ENST00000606902 342 ntBASIC4□□□□□ -1.77
SCN4AP35499 AC078899.5-201ENST00000612475 178 ntBASIC4□□□□□ -1.77
SCN4AP35499 AC244205.2-202ENST00000635781 342 ntBASIC4□□□□□ -1.77
SCN4AP35499 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SCN4AP35499 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SCN4AP35499 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN4AP35499 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN4AP35499 OTUD4P1-201ENST00000237841 3067 ntBASIC3.99□□□□□ -1.77
SCN4AP35499 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN4AP35499 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SCN4AP35499 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SCN4AP35499 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN4AP35499 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SCN4AP35499 RNA5SP502-201ENST00000362694 119 ntBASIC3.99□□□□□ -1.77
SCN4AP35499 RPL5P18-201ENST00000406671 891 ntBASIC3.99□□□□□ -1.77
SCN4AP35499 AMD1P2-201ENST00000412936 992 ntBASIC3.99□□□□□ -1.77
SCN4AP35499 EEF1A1P41-201ENST00000414667 207 ntBASIC3.99□□□□□ -1.77
SCN4AP35499 HMGB3P9-201ENST00000441799 583 ntBASIC3.99□□□□□ -1.77
SCN4AP35499 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN4AP35499 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4AP35499 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN4AP35499 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN4AP35499 AL732372.2-225ENST00000642124 456 ntBASIC3.99□□□□□ -1.77
SCN4AP35499 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SCN4AP35499 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SCN4AP35499 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN4AP35499 RNU6-167P-201ENST00000384292 106 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 SNORA81-201ENST00000408493 178 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN4AP35499 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN4AP35499 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN4AP35499 RPL31P50-201ENST00000471002 296 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 AP006245.1-201ENST00000522549 120 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 AC006518.1-201ENST00000541449 943 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 AC026333.2-201ENST00000542164 106 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 AL161912.3-201ENST00000605404 628 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 AC006946.3-201ENST00000609791 756 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.98□□□□□ -1.77
SCN4AP35499 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SCN4AP35499 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN4AP35499 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SCN4AP35499 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN4AP35499 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN4AP35499 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SCN4AP35499 RN7SKP56-201ENST00000410513 331 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 ANP32BP2-201ENST00000454525 545 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 RPS4XP2-201ENST00000458402 793 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN4AP35499 S100A11P1-201ENST00000477525 312 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 AC068724.1-201ENST00000487100 792 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN4AP35499 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN4AP35499 AC093755.1-201ENST00000512950 1023 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.98□□□□□ -1.77
SCN4AP35499 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN4AP35499 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN4AP35499 AC087888.1-201ENST00000550884 1254 ntBASIC3.98□□□□□ -1.77
SCN4AP35499 AL450472.3-201ENST00000615578 367 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms