Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HOXD12P35452 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
HOXD12P35452 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXD12P35452 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
HOXD12P35452 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXD12P35452 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HOXD12P35452 AC125257.1-201ENST00000560400 2930 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 HMGB1P5-201ENST00000255320 642 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 AC016716.1-201ENST00000265882 708 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD12P35452 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD12P35452 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HOXD12P35452 SNORD65.1-201ENST00000390889 71 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 RNA5SP345-201ENST00000410646 108 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 TBCAP2-201ENST00000416175 326 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 QRSL1P2-201ENST00000418582 964 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD12P35452 OR2B7P-201ENST00000429302 934 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 USP9YP31-201ENST00000431405 881 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 YWHAZP7-201ENST00000436906 631 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 MTCYBP34-201ENST00000439552 670 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 AL450023.3-201ENST00000440592 271 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXD12P35452 AC104306.1-201ENST00000449702 371 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 NUTF2P7-201ENST00000453086 375 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD12P35452 snoU13.7-201ENST00000459220 104 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD12P35452 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD12P35452 AC013356.1-201ENST00000489027 564 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 AC083829.1-201ENST00000503756 657 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD12P35452 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD12P35452 RNA5SP392-201ENST00000516905 112 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 SOD1P3-201ENST00000518682 454 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD12P35452 AF279873.1-201ENST00000523393 313 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXD12P35452 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD12P35452 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD12P35452 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD12P35452 AC135628.1-201ENST00000568867 534 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 AC002400.1-201ENST00000569310 726 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 RN7SL802P-201ENST00000577858 299 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 MIR3160-1-201ENST00000577972 85 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 AP005136.1-201ENST00000579765 429 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXD12P35452 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXD12P35452 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXD12P35452 AL121932.1-201ENST00000605542 214 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 AC113194.1-201ENST00000606037 500 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 AL121873.1-201ENST00000616013 524 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXD12P35452 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD12P35452 ZFRP1-201ENST00000457579 2970 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HOXD12P35452 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD12P35452 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXD12P35452 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD12P35452 AL355852.1-201ENST00000454081 1771 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXD12P35452 AL445487.1-201ENST00000415694 1580 ntBASIC4.78□□□□□ -1.64
HOXD12P35452 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
HOXD12P35452 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.78□□□□□ -1.65
HOXD12P35452 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
HOXD12P35452 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
HOXD12P35452 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 RNU6-1151P-201ENST00000384684 107 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 MIR153-1-201ENST00000384914 90 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 U3.22-201ENST00000391120 215 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 TAF9BP1-201ENST00000396646 746 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 RN7SKP267-201ENST00000410381 285 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 OR51A3P-201ENST00000413596 924 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXD12P35452 SEPT2P1-201ENST00000419651 180 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD12P35452 MRPS36P1-201ENST00000421291 307 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD12P35452 FABP7P1-201ENST00000424004 391 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AL513175.1-201ENST00000431492 780 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXD12P35452 SEPT7P5-201ENST00000434048 306 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD12P35452 AC093155.1-201ENST00000440164 826 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD12P35452 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXD12P35452 AC133473.1-201ENST00000455173 299 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC010469.1-201ENST00000463864 576 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 GAPDHP36-201ENST00000480688 918 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 VPS26AP1-201ENST00000483197 979 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 WBP1LP4-201ENST00000505043 344 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC104090.1-201ENST00000506341 1171 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXD12P35452 OR5BM1P-201ENST00000512021 366 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 RNU2-30P-201ENST00000516209 141 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms