Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LMNB1P20700 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMNB1P20700 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMNB1P20700 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMNB1P20700 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
LMNB1P20700 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMNB1P20700 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMNB1P20700 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.29□□□□□ -1.4
LMNB1P20700 SNRPEP3-201ENST00000338402 276 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 SNORA72.1-201ENST00000363485 129 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMNB1P20700 RNU6-657P-201ENST00000383904 107 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 U8.14-201ENST00000390843 143 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMNB1P20700 AC233728.2-201ENST00000425348 757 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 AC234779.1-201ENST00000425910 285 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 RLIMP2-201ENST00000427891 1563 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 ZYG11AP1-201ENST00000430329 837 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.29□□□□□ -1.4
LMNB1P20700 MTATP6P30-201ENST00000443540 664 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 RPL7P36-201ENST00000444633 681 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.29□□□□□ -1.4
LMNB1P20700 NDUFA5P7-201ENST00000452914 242 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.29□□□□□ -1.4
LMNB1P20700 RPL7AP52-201ENST00000458096 790 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 PPIAP21-201ENST00000464473 501 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.29□□□□□ -1.4
LMNB1P20700 AC114981.1-201ENST00000503897 678 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.29□□□□□ -1.4
LMNB1P20700 NDUFB4P2-201ENST00000509515 391 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMNB1P20700 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.29□□□□□ -1.4
LMNB1P20700 RNU6-507P-201ENST00000516045 100 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.29□□□□□ -1.4
LMNB1P20700 AC008562.1-201ENST00000521763 330 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 AC100784.1-201ENST00000522790 310 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.29□□□□□ -1.4
LMNB1P20700 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.29□□□□□ -1.4
LMNB1P20700 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.29□□□□□ -1.4
LMNB1P20700 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.29□□□□□ -1.4
LMNB1P20700 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
LMNB1P20700 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.29□□□□□ -1.4
LMNB1P20700 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.29□□□□□ -1.4
LMNB1P20700 AP001521.2-201ENST00000608772 546 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 AP001521.1-201ENST00000609150 300 ntBASIC6.29□□□□□ -1.4
LMNB1P20700 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMNB1P20700 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.29□□□□□ -1.4
LMNB1P20700 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMNB1P20700 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
LMNB1P20700 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMNB1P20700 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMNB1P20700 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LMNB1P20700 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LMNB1P20700 RNU6-115P-201ENST00000364310 107 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMNB1P20700 SNORA51.12-201ENST00000384448 134 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 RNU6-114P-201ENST00000384704 105 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 RNU6-780P-201ENST00000391030 104 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
LMNB1P20700 VN1R8P-201ENST00000407739 893 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 RN7SKP263-201ENST00000411194 309 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.28□□□□□ -1.4
LMNB1P20700 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.28□□□□□ -1.4
LMNB1P20700 BTF3P10-201ENST00000433415 495 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 RPL37P21-201ENST00000435890 276 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.28□□□□□ -1.4
LMNB1P20700 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.28□□□□□ -1.4
LMNB1P20700 AC004865.1-201ENST00000442276 1003 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 MTND5P20-201ENST00000448677 143 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 USP9YP12-201ENST00000450481 570 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.28□□□□□ -1.4
LMNB1P20700 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.28□□□□□ -1.4
LMNB1P20700 RN7SL188P-201ENST00000469842 285 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.28□□□□□ -1.4
LMNB1P20700 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.28□□□□□ -1.4
LMNB1P20700 Y_RNA.702-201ENST00000516843 96 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 OR8Q1P-201ENST00000526467 655 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC6.28□□□□□ -1.4
LMNB1P20700 AP001646.1-201ENST00000527936 915 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.28□□□□□ -1.4
LMNB1P20700 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
LMNB1P20700 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.28□□□□□ -1.4
LMNB1P20700 MIR4715-201ENST00000584117 79 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AC006504.3-201ENST00000586818 523 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 BNIP3P8-201ENST00000597863 560 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AC009027.1-201ENST00000604510 479 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AC090578.1-201ENST00000604955 591 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.28□□□□□ -1.4
LMNB1P20700 AC104458.1-201ENST00000608243 463 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AC008250.2-201ENST00000615261 205 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AC231657.1-201ENST00000624313 397 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LMNB1P20700 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
LMNB1P20700 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMNB1P20700 AC090017.1-201ENST00000548612 1779 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LMNB1P20700 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.28□□□□□ -1.4
LMNB1P20700 AC138907.8-201ENST00000623981 2256 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 AC011933.2-201ENST00000578539 2790 ntBASIC6.28□□□□□ -1.4
LMNB1P20700 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.27□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms