Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.09□□□□□ -1.43
NFKB1P19838 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NFKB1P19838 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.09□□□□□ -1.43
NFKB1P19838 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NFKB1P19838 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NFKB1P19838 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NFKB1P19838 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NFKB1P19838 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NFKB1P19838 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
NFKB1P19838 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
NFKB1P19838 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.09□□□□□ -1.44
NFKB1P19838 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NFKB1P19838 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC6.09□□□□□ -1.44
NFKB1P19838 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
NFKB1P19838 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.08□□□□□ -1.44
NFKB1P19838 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NFKB1P19838 AL161756.3-201ENST00000641216 2071 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
NFKB1P19838 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NFKB1P19838 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NFKB1P19838 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NFKB1P19838 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NFKB1P19838 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
NFKB1P19838 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NFKB1P19838 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NFKB1P19838 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.08□□□□□ -1.44
NFKB1P19838 OR1S2-201ENST00000302592 978 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 Y_RNA.187-201ENST00000363918 113 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 Y_RNA.193-201ENST00000363979 102 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 RNA5SP394-201ENST00000364216 119 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 RNA5SP211-201ENST00000365516 117 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 SNORA51.9-201ENST00000384295 124 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 RNU6-921P-201ENST00000384361 107 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 MT-TG-201ENST00000387429 68 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 CISD1P1-201ENST00000393907 327 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 AL078604.1-201ENST00000404609 466 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 MIR1275-201ENST00000408770 80 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NFKB1P19838 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.08□□□□□ -1.44
NFKB1P19838 AC092651.1-201ENST00000426110 312 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 AC137499.1-201ENST00000427602 88 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.08□□□□□ -1.44
NFKB1P19838 USP9YP16-201ENST00000430287 407 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 AL137792.2-201ENST00000443484 235 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.08□□□□□ -1.44
NFKB1P19838 USP9YP23-201ENST00000455085 407 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 TRBV5-2-201ENST00000489095 273 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 TOMM22P4-201ENST00000511318 336 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.08□□□□□ -1.44
NFKB1P19838 SMURF2P1-201ENST00000514992 481 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NFKB1P19838 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NFKB1P19838 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.08□□□□□ -1.44
NFKB1P19838 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.08□□□□□ -1.44
NFKB1P19838 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.08□□□□□ -1.44
NFKB1P19838 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.08□□□□□ -1.44
NFKB1P19838 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NFKB1P19838 AP001029.3-201ENST00000588063 596 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 AC245389.1-201ENST00000605141 529 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 AP000654.2-201ENST00000605633 586 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.08□□□□□ -1.44
NFKB1P19838 AC244100.4-201ENST00000617747 388 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 AC018628.1-201ENST00000624147 3819 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
NFKB1P19838 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NFKB1P19838 VPS35P1-201ENST00000563400 1518 ntBASIC6.08□□□□□ -1.44
NFKB1P19838 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NFKB1P19838 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NFKB1P19838 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.08□□□□□ -1.44
NFKB1P19838 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NFKB1P19838 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.08□□□□□ -1.44
NFKB1P19838 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NFKB1P19838 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
NFKB1P19838 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.07□□□□□ -1.44
NFKB1P19838 HSPA8P18-201ENST00000439846 1928 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 GNL2P1-201ENST00000451274 2190 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NFKB1P19838 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NFKB1P19838 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.07□□□□□ -1.44
NFKB1P19838 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.07□□□□□ -1.44
NFKB1P19838 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NFKB1P19838 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.07□□□□□ -1.44
NFKB1P19838 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
NFKB1P19838 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NFKB1P19838 RNA5SP514-201ENST00000363717 111 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 RNU6-522P-201ENST00000364497 107 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 AC117470.1-201ENST00000381974 330 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.07□□□□□ -1.44
NFKB1P19838 MIR130B-202ENST00000385018 82 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 ARF4P3-201ENST00000397387 509 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 MIR548F4-201ENST00000408515 105 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 Y_RNA.618-201ENST00000410949 107 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 METTL15P3-201ENST00000415522 1221 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 RPL34P6-201ENST00000432390 345 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.07□□□□□ -1.44
NFKB1P19838 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NFKB1P19838 RPL23AP74-201ENST00000437246 471 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 Z98949.2-201ENST00000440996 144 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 AC097463.1-201ENST00000447288 481 ntBASIC6.07□□□□□ -1.44
NFKB1P19838 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms