Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC006499.2-201ENST00000513470 337 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 SNORA18.6-201ENST00000516792 115 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 OR5AP1P-201ENST00000529730 940 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC024940.3-201ENST00000538551 316 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC027667.1-201ENST00000545814 304 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 GSTP1P1-201ENST00000548078 319 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC007151.1-201ENST00000572774 483 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC137800.2-201ENST00000574375 120 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 BNIP3P22-201ENST00000593399 556 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC087283.1-201ENST00000604029 1074 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC010200.2-201ENST00000605098 235 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 BNIP3P10-201ENST00000605360 577 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC103710.1-201ENST00000610003 901 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AL132765.2-201ENST00000610812 351 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC008250.2-201ENST00000615261 205 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AL139089.1-201ENST00000620372 975 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC099494.2-201ENST00000623371 978 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 AC093591.3-201ENST00000634516 308 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 SMG1P7-201ENST00000565246 2704 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 DCAF13P1-201ENST00000495256 1330 ntBASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CSB-PGBD3P0DP91 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CSB-PGBD3P0DP91 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.21□□□□□ -1.25
CSB-PGBD3P0DP91 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
CSB-PGBD3P0DP91 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CSB-PGBD3P0DP91 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.21□□□□□ -1.25
CSB-PGBD3P0DP91 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 Y_RNA.97-201ENST00000363094 102 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 MIR105-1-201ENST00000385222 81 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 PRRC2CP1-201ENST00000404428 159 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AC008280.1-201ENST00000418851 412 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AL353729.1-201ENST00000425044 720 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AL358934.1-201ENST00000432346 324 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 TAAR7P-201ENST00000436141 242 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 GAPDHP25-201ENST00000447061 1001 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AC087312.1-201ENST00000471411 480 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 OR51K1P-201ENST00000510214 950 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AC093012.1-202ENST00000549403 582 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AC078814.3-201ENST00000553036 491 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 MIR4330-201ENST00000579077 105 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 PRELID3BP8-201ENST00000604148 295 ntBASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CSB-PGBD3P0DP91 CASC19-221ENST00000641309 1382 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 SNORA70H-201ENST00000383910 135 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 SNORA70J-201ENST00000384182 135 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 RNU6-907P-201ENST00000390924 102 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC004987.3-201ENST00000413879 771 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms