Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TPM1P09493 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
TPM1P09493 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.93□□□□□ -1.78
TPM1P09493 CENPUP2-201ENST00000555897 1186 ntBASIC3.93□□□□□ -1.78
TPM1P09493 AC037471.2-201ENST00000564941 598 ntBASIC3.93□□□□□ -1.78
TPM1P09493 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.93□□□□□ -1.78
TPM1P09493 AC010928.3-201ENST00000587712 541 ntBASIC3.93□□□□□ -1.78
TPM1P09493 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.93□□□□□ -1.78
TPM1P09493 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.93□□□□□ -1.78
TPM1P09493 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TPM1P09493 AC018754.1-201ENST00000607486 925 ntBASIC3.93□□□□□ -1.78
TPM1P09493 AC022149.2-201ENST00000621061 203 ntBASIC3.93□□□□□ -1.78
TPM1P09493 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.93□□□□□ -1.78
TPM1P09493 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TPM1P09493 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TPM1P09493 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.93□□□□□ -1.78
TPM1P09493 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.93□□□□□ -1.78
TPM1P09493 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TPM1P09493 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TPM1P09493 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.92□□□□□ -1.78
TPM1P09493 AC007656.2-201ENST00000624902 4547 ntBASIC3.92□□□□□ -1.78
TPM1P09493 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TPM1P09493 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TPM1P09493 RNA5SP383-201ENST00000362934 120 ntBASIC3.92□□□□□ -1.78
TPM1P09493 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.92□□□□□ -1.78
TPM1P09493 AC093578.1-201ENST00000415219 368 ntBASIC3.92□□□□□ -1.78
TPM1P09493 RPL26P29-201ENST00000415623 438 ntBASIC3.92□□□□□ -1.78
TPM1P09493 AC245291.1-201ENST00000419501 328 ntBASIC3.92□□□□□ -1.78
TPM1P09493 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.92□□□□□ -1.78
TPM1P09493 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.92□□□□□ -1.78
TPM1P09493 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.92□□□□□ -1.78
TPM1P09493 FAR1P1-201ENST00000427163 934 ntBASIC3.92□□□□□ -1.78
TPM1P09493 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.92□□□□□ -1.78
TPM1P09493 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.92□□□□□ -1.78
TPM1P09493 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.92□□□□□ -1.78
TPM1P09493 AL357552.1-201ENST00000445254 415 ntBASIC3.92□□□□□ -1.78
TPM1P09493 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.92□□□□□ -1.78
TPM1P09493 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.92□□□□□ -1.78
TPM1P09493 RPL7P19-201ENST00000469948 618 ntBASIC3.92□□□□□ -1.78
TPM1P09493 AC023598.1-201ENST00000472521 361 ntBASIC3.92□□□□□ -1.78
TPM1P09493 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TPM1P09493 SNORA70.19-201ENST00000516717 90 ntBASIC3.92□□□□□ -1.78
TPM1P09493 IGKV2-36-201ENST00000519999 223 ntBASIC3.92□□□□□ -1.78
TPM1P09493 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.92□□□□□ -1.78
TPM1P09493 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.92□□□□□ -1.78
TPM1P09493 DUXAP6-201ENST00000553858 601 ntBASIC3.92□□□□□ -1.78
TPM1P09493 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.92□□□□□ -1.78
TPM1P09493 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TPM1P09493 AL591034.3-201ENST00000605511 685 ntBASIC3.92□□□□□ -1.78
TPM1P09493 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TPM1P09493 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TPM1P09493 MIR8058-201ENST00000615737 89 ntBASIC3.92□□□□□ -1.78
TPM1P09493 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TPM1P09493 AC048347.1-201ENST00000624621 427 ntBASIC3.92□□□□□ -1.78
TPM1P09493 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.92□□□□□ -1.78
TPM1P09493 AL157700.1-201ENST00000561973 1432 ntBASIC3.92□□□□□ -1.78
TPM1P09493 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.92□□□□□ -1.78
TPM1P09493 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TPM1P09493 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TPM1P09493 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
TPM1P09493 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
TPM1P09493 AC005183.1-201ENST00000603687 1979 ntBASIC3.91□□□□□ -1.78
TPM1P09493 RNU6-213P-201ENST00000384051 104 ntBASIC3.91□□□□□ -1.78
TPM1P09493 SNORA70C-201ENST00000384538 135 ntBASIC3.91□□□□□ -1.78
TPM1P09493 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TPM1P09493 AL590290.1-201ENST00000405336 380 ntBASIC3.91□□□□□ -1.78
TPM1P09493 MTND4P22-201ENST00000413116 1169 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AL139247.1-201ENST00000422768 325 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AL513174.1-201ENST00000423182 629 ntBASIC3.91□□□□□ -1.78
TPM1P09493 GLRXP1-201ENST00000423261 334 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AL591419.1-201ENST00000427423 339 ntBASIC3.91□□□□□ -1.78
TPM1P09493 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.91□□□□□ -1.78
TPM1P09493 RPL23AP22-201ENST00000437556 453 ntBASIC3.91□□□□□ -1.78
TPM1P09493 RPL29P29-201ENST00000448725 423 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.91□□□□□ -1.78
TPM1P09493 AC096992.1-201ENST00000459808 709 ntBASIC3.91□□□□□ -1.78
TPM1P09493 RPL23AP67-201ENST00000465341 474 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AC084357.1-201ENST00000473404 255 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.91□□□□□ -1.78
TPM1P09493 FTH1P21-201ENST00000512179 511 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.91□□□□□ -1.78
TPM1P09493 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.91□□□□□ -1.78
TPM1P09493 AP002812.4-201ENST00000532139 286 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.91□□□□□ -1.78
TPM1P09493 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TPM1P09493 CR383656.6-201ENST00000550518 394 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AC025884.1-201ENST00000556034 378 ntBASIC3.91□□□□□ -1.78
TPM1P09493 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.91□□□□□ -1.78
TPM1P09493 AC008507.1-201ENST00000587506 734 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AC008745.1-201ENST00000604064 271 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.91□□□□□ -1.78
TPM1P09493 MIR6716-201ENST00000613413 80 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AP003355.3-201ENST00000623465 114 ntBASIC3.91□□□□□ -1.78
TPM1P09493 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.91□□□□□ -1.78
TPM1P09493 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.91□□□□□ -1.78
TPM1P09493 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TPM1P09493 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TPM1P09493 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TPM1P09493 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.9□□□□□ -1.79
TPM1P09493 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms