Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC018529.3-201ENST00000624212 2254 ntBASIC4.53□□□□□ -1.68
RB1P06400 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RB1P06400 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.53□□□□□ -1.68
RB1P06400 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RB1P06400 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RB1P06400 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.53□□□□□ -1.68
RB1P06400 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.69
RB1P06400 MTND4P8-201ENST00000514997 1362 ntBASIC4.53□□□□□ -1.69
RB1P06400 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RB1P06400 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.52□□□□□ -1.69
RB1P06400 AC139713.2-215ENST00000641428 5037 ntBASIC4.52□□□□□ -1.69
RB1P06400 Z82217.1-201ENST00000625157 8149 ntBASIC4.52□□□□□ -1.69
RB1P06400 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RB1P06400 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RB1P06400 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RB1P06400 RNU6-1279P-201ENST00000383917 103 ntBASIC4.52□□□□□ -1.69
RB1P06400 RNU6-1293P-201ENST00000384077 107 ntBASIC4.52□□□□□ -1.69
RB1P06400 RNU11-4P-201ENST00000391149 133 ntBASIC4.52□□□□□ -1.69
RB1P06400 RNU6-584P-201ENST00000410350 95 ntBASIC4.52□□□□□ -1.69
RB1P06400 CYCSP10-201ENST00000417973 294 ntBASIC4.52□□□□□ -1.69
RB1P06400 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.52□□□□□ -1.69
RB1P06400 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.52□□□□□ -1.69
RB1P06400 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.52□□□□□ -1.69
RB1P06400 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.52□□□□□ -1.69
RB1P06400 NPM1P13-201ENST00000452663 865 ntBASIC4.52□□□□□ -1.69
RB1P06400 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.52□□□□□ -1.69
RB1P06400 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.52□□□□□ -1.69
RB1P06400 DUXAP8-207ENST00000456786 622 ntBASIC4.52□□□□□ -1.69
RB1P06400 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.52□□□□□ -1.69
RB1P06400 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
RB1P06400 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RB1P06400 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.52□□□□□ -1.69
RB1P06400 AC110792.2-201ENST00000510278 224 ntBASIC4.52□□□□□ -1.69
RB1P06400 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.52□□□□□ -1.69
RB1P06400 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.52□□□□□ -1.69
RB1P06400 AC107982.3-201ENST00000584957 985 ntBASIC4.52□□□□□ -1.69
RB1P06400 AL160237.3-201ENST00000604114 1013 ntBASIC4.52□□□□□ -1.69
RB1P06400 AL365400.2-201ENST00000605604 902 ntBASIC4.52□□□□□ -1.69
RB1P06400 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.52□□□□□ -1.69
RB1P06400 DUXAP10-204ENST00000612052 616 ntBASIC4.52□□□□□ -1.69
RB1P06400 MIR6864-201ENST00000617935 70 ntBASIC4.52□□□□□ -1.69
RB1P06400 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.52□□□□□ -1.69
RB1P06400 RNU6-156P-201ENST00000621869 107 ntBASIC4.52□□□□□ -1.69
RB1P06400 AC000123.2-201ENST00000623124 461 ntBASIC4.52□□□□□ -1.69
RB1P06400 AL356121.2-201ENST00000624715 780 ntBASIC4.52□□□□□ -1.69
RB1P06400 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.52□□□□□ -1.69
RB1P06400 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.52□□□□□ -1.69
RB1P06400 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.52□□□□□ -1.69
RB1P06400 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
RB1P06400 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.52□□□□□ -1.69
RB1P06400 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.52□□□□□ -1.69
RB1P06400 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RB1P06400 AL672167.1-205ENST00000641112 3080 ntBASIC4.52□□□□□ -1.69
RB1P06400 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RB1P06400 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RB1P06400 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.51□□□□□ -1.69
RB1P06400 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RB1P06400 RNU4-51P-201ENST00000364206 140 ntBASIC4.51□□□□□ -1.69
RB1P06400 RNA5SP387-201ENST00000364226 106 ntBASIC4.51□□□□□ -1.69
RB1P06400 GSTA8P-201ENST00000404253 637 ntBASIC4.51□□□□□ -1.69
RB1P06400 AL078604.1-201ENST00000404609 466 ntBASIC4.51□□□□□ -1.69
RB1P06400 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.51□□□□□ -1.69
RB1P06400 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.51□□□□□ -1.69
RB1P06400 Z74021.1-201ENST00000423610 407 ntBASIC4.51□□□□□ -1.69
RB1P06400 MTCYBP32-201ENST00000427945 1084 ntBASIC4.51□□□□□ -1.69
RB1P06400 RPS27AP15-201ENST00000447672 466 ntBASIC4.51□□□□□ -1.69
RB1P06400 AC104306.1-201ENST00000449702 371 ntBASIC4.51□□□□□ -1.69
RB1P06400 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RB1P06400 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RB1P06400 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.51□□□□□ -1.69
RB1P06400 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.51□□□□□ -1.69
RB1P06400 RPL21P131-201ENST00000497298 483 ntBASIC4.51□□□□□ -1.69
RB1P06400 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RB1P06400 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.51□□□□□ -1.69
RB1P06400 AC113420.1-201ENST00000507903 571 ntBASIC4.51□□□□□ -1.69
RB1P06400 KRT19P6-201ENST00000510983 209 ntBASIC4.51□□□□□ -1.69
RB1P06400 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.51□□□□□ -1.69
RB1P06400 AC022790.1-201ENST00000522872 204 ntBASIC4.51□□□□□ -1.69
RB1P06400 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.51□□□□□ -1.69
RB1P06400 DEFB109D-201ENST00000529497 240 ntBASIC4.51□□□□□ -1.69
RB1P06400 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.51□□□□□ -1.69
RB1P06400 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.51□□□□□ -1.69
RB1P06400 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.51□□□□□ -1.69
RB1P06400 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.51□□□□□ -1.69
RB1P06400 MTCYBP23-201ENST00000558717 1102 ntBASIC4.51□□□□□ -1.69
RB1P06400 AL049838.1-201ENST00000563647 981 ntBASIC4.51□□□□□ -1.69
RB1P06400 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.51□□□□□ -1.69
RB1P06400 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.51□□□□□ -1.69
RB1P06400 AC005255.1-201ENST00000593748 216 ntBASIC4.51□□□□□ -1.69
RB1P06400 AL391001.1-201ENST00000602747 715 ntBASIC4.51□□□□□ -1.69
RB1P06400 AL390816.3-201ENST00000604527 1066 ntBASIC4.51□□□□□ -1.69
RB1P06400 SNORA51-201ENST00000606420 132 ntBASIC4.51□□□□□ -1.69
RB1P06400 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.51□□□□□ -1.69
RB1P06400 AL158196.1-201ENST00000616786 434 ntBASIC4.51□□□□□ -1.69
RB1P06400 AC140113.4-201ENST00000622087 222 ntBASIC4.51□□□□□ -1.69
RB1P06400 AC023510.2-201ENST00000622162 746 ntBASIC4.51□□□□□ -1.69
RB1P06400 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.51□□□□□ -1.69
RB1P06400 AC067852.7-201ENST00000623270 535 ntBASIC4.51□□□□□ -1.69
RB1P06400 AC012442.3-202ENST00000636742 206 ntBASIC4.51□□□□□ -1.69
RB1P06400 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms