Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC1.97□□□□□ -2.09
APOBP04114 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
APOBP04114 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
APOBP04114 AC005332.5-201ENST00000591222 2919 ntBASIC1.97□□□□□ -2.09
APOBP04114 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
APOBP04114 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
APOBP04114 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
APOBP04114 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
APOBP04114 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
APOBP04114 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
APOBP04114 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
APOBP04114 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC1.97□□□□□ -2.09
APOBP04114 AC019097.1-201ENST00000424783 735 ntBASIC1.97□□□□□ -2.09
APOBP04114 TRBV12-1-201ENST00000479785 344 ntBASIC1.97□□□□□ -2.09
APOBP04114 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.97□□□□□ -2.09
APOBP04114 AC027176.1-201ENST00000560204 514 ntBASIC1.97□□□□□ -2.09
APOBP04114 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC1.97□□□□□ -2.09
APOBP04114 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC1.97□□□□□ -2.09
APOBP04114 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.97□□□□□ -2.09
APOBP04114 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
APOBP04114 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
APOBP04114 YES1-203ENST00000577961 4554 ntTSL 5 BASIC1.97□□□□□ -2.09
APOBP04114 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
APOBP04114 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.96□□□□□ -2.09
APOBP04114 AL672167.1-206ENST00000356293 943 ntBASIC1.96□□□□□ -2.09
APOBP04114 SNORD74.4-201ENST00000364129 80 ntBASIC1.96□□□□□ -2.09
APOBP04114 HDGFP1-201ENST00000405943 252 ntBASIC1.96□□□□□ -2.09
APOBP04114 AL645937.1-202ENST00000421799 937 ntBASIC1.96□□□□□ -2.09
APOBP04114 AL513174.1-201ENST00000423182 629 ntBASIC1.96□□□□□ -2.09
APOBP04114 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.96□□□□□ -2.09
APOBP04114 AC132942.1-201ENST00000486753 483 ntBASIC1.96□□□□□ -2.09
APOBP04114 FAM172BP-201ENST00000487497 1089 ntBASIC1.96□□□□□ -2.09
APOBP04114 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.96□□□□□ -2.09
APOBP04114 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC1.96□□□□□ -2.09
APOBP04114 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.96□□□□□ -2.09
APOBP04114 EIF1P6-201ENST00000600054 334 ntBASIC1.96□□□□□ -2.09
APOBP04114 AC007566.2-201ENST00000603642 413 ntBASIC1.96□□□□□ -2.09
APOBP04114 AC007318.2-201ENST00000620999 243 ntBASIC1.96□□□□□ -2.09
APOBP04114 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.96□□□□□ -2.09
APOBP04114 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
APOBP04114 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
APOBP04114 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
APOBP04114 AL391417.1-201ENST00000404100 426 ntBASIC1.96□□□□□ -2.1
APOBP04114 SETP4-201ENST00000455717 868 ntBASIC1.96□□□□□ -2.1
APOBP04114 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC1.96□□□□□ -2.1
APOBP04114 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC1.96□□□□□ -2.1
APOBP04114 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC1.96□□□□□ -2.1
APOBP04114 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC1.96□□□□□ -2.1
APOBP04114 uc_338.1-201ENST00000612113 180 ntBASIC1.96□□□□□ -2.1
APOBP04114 uc_338.25-201ENST00000613756 156 ntBASIC1.96□□□□□ -2.1
APOBP04114 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC1.96□□□□□ -2.1
APOBP04114 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
APOBP04114 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
APOBP04114 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
APOBP04114 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC1.96□□□□□ -2.1
APOBP04114 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC1.96□□□□□ -2.1
APOBP04114 AL445529.1-201ENST00000398713 389 ntBASIC1.96□□□□□ -2.1
APOBP04114 DUTP6-201ENST00000425573 462 ntBASIC1.96□□□□□ -2.1
APOBP04114 HMGB1P18-201ENST00000438801 619 ntBASIC1.96□□□□□ -2.1
APOBP04114 AP000936.2-201ENST00000447151 681 ntBASIC1.96□□□□□ -2.1
APOBP04114 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC1.96□□□□□ -2.1
APOBP04114 OR5AP1P-201ENST00000529730 940 ntBASIC1.96□□□□□ -2.1
APOBP04114 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.96□□□□□ -2.1
APOBP04114 CYCSP41-201ENST00000616920 296 ntBASIC1.96□□□□□ -2.1
APOBP04114 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.96□□□□□ -2.1
APOBP04114 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
APOBP04114 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
APOBP04114 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
APOBP04114 AC018529.3-201ENST00000624212 2254 ntBASIC1.96□□□□□ -2.1
APOBP04114 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
APOBP04114 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
APOBP04114 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
APOBP04114 AL592148.1-201ENST00000413568 445 ntBASIC1.96□□□□□ -2.1
APOBP04114 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC1.96□□□□□ -2.1
APOBP04114 AC092447.2-201ENST00000435487 669 ntBASIC1.96□□□□□ -2.1
APOBP04114 ELOCP23-201ENST00000452014 332 ntBASIC1.96□□□□□ -2.1
APOBP04114 AL136097.1-201ENST00000456945 913 ntBASIC1.96□□□□□ -2.1
APOBP04114 HSPE1P6-201ENST00000479457 291 ntBASIC1.96□□□□□ -2.1
APOBP04114 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
APOBP04114 AC010306.1-201ENST00000523223 1117 ntBASIC1.96□□□□□ -2.1
APOBP04114 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.96□□□□□ -2.1
APOBP04114 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC1.96□□□□□ -2.1
APOBP04114 MIR4425-201ENST00000580572 84 ntBASIC1.96□□□□□ -2.1
APOBP04114 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC1.96□□□□□ -2.1
APOBP04114 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC1.96□□□□□ -2.1
APOBP04114 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
APOBP04114 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
APOBP04114 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
APOBP04114 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
APOBP04114 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
APOBP04114 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOBP04114 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOBP04114 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
APOBP04114 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.95□□□□□ -2.1
APOBP04114 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC1.95□□□□□ -2.1
APOBP04114 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOBP04114 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.95□□□□□ -2.1
APOBP04114 AC009163.5-201ENST00000575421 637 ntBASIC1.95□□□□□ -2.1
APOBP04114 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOBP04114 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms