Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.72□□□□□ -1.81
APOEP02649 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
APOEP02649 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
APOEP02649 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
APOEP02649 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
APOEP02649 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOEP02649 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOEP02649 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
APOEP02649 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
APOEP02649 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOEP02649 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
APOEP02649 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOEP02649 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOEP02649 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.71□□□□□ -1.82
APOEP02649 MIR23B-201ENST00000384832 97 ntBASIC3.71□□□□□ -1.82
APOEP02649 MIR218-2-201ENST00000385006 110 ntBASIC3.71□□□□□ -1.82
APOEP02649 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOEP02649 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
APOEP02649 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.71□□□□□ -1.82
APOEP02649 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.71□□□□□ -1.82
APOEP02649 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.71□□□□□ -1.82
APOEP02649 CYCSP4-201ENST00000429682 331 ntBASIC3.71□□□□□ -1.82
APOEP02649 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.71□□□□□ -1.82
APOEP02649 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.71□□□□□ -1.82
APOEP02649 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.71□□□□□ -1.82
APOEP02649 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.71□□□□□ -1.82
APOEP02649 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.71□□□□□ -1.82
APOEP02649 TMED11P-201ENST00000479478 690 ntBASIC3.71□□□□□ -1.82
APOEP02649 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.71□□□□□ -1.82
APOEP02649 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.71□□□□□ -1.82
APOEP02649 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.71□□□□□ -1.82
APOEP02649 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.71□□□□□ -1.82
APOEP02649 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.71□□□□□ -1.82
APOEP02649 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.71□□□□□ -1.82
APOEP02649 AL845331.3-202ENST00000562856 261 ntBASIC3.71□□□□□ -1.82
APOEP02649 MIR4512-201ENST00000583257 77 ntBASIC3.71□□□□□ -1.82
APOEP02649 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOEP02649 AC008739.3-201ENST00000603262 127 ntBASIC3.71□□□□□ -1.82
APOEP02649 U3.45-201ENST00000607547 219 ntBASIC3.71□□□□□ -1.82
APOEP02649 AC112200.1-201ENST00000625015 234 ntBASIC3.71□□□□□ -1.82
APOEP02649 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOEP02649 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.71□□□□□ -1.82
APOEP02649 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOEP02649 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOEP02649 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOEP02649 AC017002.4-201ENST00000604721 1525 ntBASIC3.7□□□□□ -1.82
APOEP02649 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.7□□□□□ -1.82
APOEP02649 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOEP02649 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOEP02649 RNA5SP42-201ENST00000364278 115 ntBASIC3.7□□□□□ -1.82
APOEP02649 MIR670-201ENST00000390142 98 ntBASIC3.7□□□□□ -1.82
APOEP02649 AC240504.1-201ENST00000395709 845 ntBASIC3.7□□□□□ -1.82
APOEP02649 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.7□□□□□ -1.82
APOEP02649 RNU2-65P-201ENST00000410162 185 ntBASIC3.7□□□□□ -1.82
APOEP02649 RPS15AP6-201ENST00000420703 385 ntBASIC3.7□□□□□ -1.82
APOEP02649 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.7□□□□□ -1.82
APOEP02649 NPM1P24-201ENST00000428039 894 ntBASIC3.7□□□□□ -1.82
APOEP02649 HMGN2P31-201ENST00000432430 273 ntBASIC3.7□□□□□ -1.82
APOEP02649 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.7□□□□□ -1.82
APOEP02649 PDSS1P2-201ENST00000449397 678 ntBASIC3.7□□□□□ -1.82
APOEP02649 AP000873.1-201ENST00000463987 400 ntBASIC3.7□□□□□ -1.82
APOEP02649 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.7□□□□□ -1.82
APOEP02649 AC023598.1-201ENST00000472521 361 ntBASIC3.7□□□□□ -1.82
APOEP02649 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
APOEP02649 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.7□□□□□ -1.82
APOEP02649 AC006499.5-201ENST00000505037 514 ntBASIC3.7□□□□□ -1.82
APOEP02649 AC113398.2-201ENST00000507630 558 ntBASIC3.7□□□□□ -1.82
APOEP02649 AC026784.1-201ENST00000507986 352 ntBASIC3.7□□□□□ -1.82
APOEP02649 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.7□□□□□ -1.82
APOEP02649 HMGN1P15-201ENST00000513870 295 ntBASIC3.7□□□□□ -1.82
APOEP02649 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.7□□□□□ -1.82
APOEP02649 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.7□□□□□ -1.82
APOEP02649 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.7□□□□□ -1.82
APOEP02649 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.7□□□□□ -1.82
APOEP02649 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.7□□□□□ -1.82
APOEP02649 ABI1P1-201ENST00000603375 1120 ntBASIC3.7□□□□□ -1.82
APOEP02649 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.7□□□□□ -1.82
APOEP02649 RNVU1-4-201ENST00000612985 164 ntBASIC3.7□□□□□ -1.82
APOEP02649 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.7□□□□□ -1.82
APOEP02649 AC243312.2-201ENST00000623340 601 ntBASIC3.7□□□□□ -1.82
APOEP02649 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.7□□□□□ -1.82
APOEP02649 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOEP02649 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.7□□□□□ -1.82
APOEP02649 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.7□□□□□ -1.82
APOEP02649 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.7□□□□□ -1.82
APOEP02649 AC005183.1-201ENST00000603687 1979 ntBASIC3.7□□□□□ -1.82
APOEP02649 AC007656.2-201ENST00000624902 4547 ntBASIC3.7□□□□□ -1.82
APOEP02649 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
APOEP02649 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.7□□□□□ -1.82
APOEP02649 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
APOEP02649 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOEP02649 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOEP02649 AC091152.2-201ENST00000591628 2569 ntBASIC3.69□□□□□ -1.82
APOEP02649 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOEP02649 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.69□□□□□ -1.82
APOEP02649 AC138915.3-201ENST00000562908 1389 ntBASIC3.69□□□□□ -1.82
APOEP02649 RN7SKP285-201ENST00000410137 318 ntBASIC3.69□□□□□ -1.82
APOEP02649 RPS12P23-201ENST00000419579 400 ntBASIC3.69□□□□□ -1.82
APOEP02649 RPL37P1-201ENST00000432310 284 ntBASIC3.69□□□□□ -1.82
APOEP02649 AC073063.1-201ENST00000434352 607 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms