Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HMGB3P13-201ENST00000511263 607 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 TCP11X3P-202ENST00000514289 1254 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 RN7SKP57-201ENST00000517248 293 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.11□□□□□ -1.75
PDGFBP01127 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.11□□□□□ -1.75
PDGFBP01127 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.11□□□□□ -1.75
PDGFBP01127 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.11□□□□□ -1.75
PDGFBP01127 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.11□□□□□ -1.75
PDGFBP01127 MIR5684-201ENST00000585074 65 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.11□□□□□ -1.75
PDGFBP01127 AC113194.1-201ENST00000606037 500 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.11□□□□□ -1.75
PDGFBP01127 AC073569.3-201ENST00000619055 682 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 AP002371.2-201ENST00000624450 503 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 AC055839.1-201ENST00000634467 498 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDGFBP01127 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PDGFBP01127 AL136520.1-201ENST00000600311 1322 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDGFBP01127 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDGFBP01127 AP004289.2-201ENST00000444413 1457 ntBASIC4.11□□□□□ -1.75
PDGFBP01127 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFBP01127 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PDGFBP01127 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PDGFBP01127 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.1□□□□□ -1.75
PDGFBP01127 NOL8P1-201ENST00000508336 3529 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.1□□□□□ -1.75
PDGFBP01127 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFBP01127 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.1□□□□□ -1.75
PDGFBP01127 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFBP01127 XIAPP3-201ENST00000312918 795 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 SNORA63.3-201ENST00000362682 132 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.1□□□□□ -1.75
PDGFBP01127 GCNT6-201ENST00000379591 934 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 MIR128-1-201ENST00000384921 82 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFBP01127 AC007066.1-201ENST00000392902 381 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC069282.1-201ENST00000411911 526 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AL158825.1-201ENST00000414735 521 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 RPS15AP40-201ENST00000419621 391 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 UBE2D3P3-201ENST00000426992 425 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 RPL29P29-201ENST00000448725 423 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.1□□□□□ -1.75
PDGFBP01127 MRPL35P4-201ENST00000453682 566 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFBP01127 RPL37P6-202ENST00000464216 403 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC106707.2-201ENST00000484182 374 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 MTND3P3-201ENST00000505004 126 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC016550.1-201ENST00000505348 785 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 SNX5P1-201ENST00000505757 1041 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.1□□□□□ -1.75
PDGFBP01127 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.1□□□□□ -1.75
PDGFBP01127 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.1□□□□□ -1.75
PDGFBP01127 HMGN1P15-201ENST00000513870 295 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 RN7SKP289-201ENST00000517244 295 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.1□□□□□ -1.75
PDGFBP01127 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.1□□□□□ -1.75
PDGFBP01127 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.1□□□□□ -1.75
PDGFBP01127 CR383656.14-201ENST00000551951 406 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 GTF2IP8-201ENST00000560687 584 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC104229.1-201ENST00000561364 255 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.1□□□□□ -1.75
PDGFBP01127 AC106734.1-201ENST00000568646 663 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.1□□□□□ -1.75
PDGFBP01127 COX6CP4-201ENST00000605798 228 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC016542.1-201ENST00000608259 493 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC097505.1-201ENST00000610199 565 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC005344.1-201ENST00000613391 459 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AL158196.1-201ENST00000616786 434 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 MIR6852-201ENST00000621699 66 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC106858.1-201ENST00000637497 429 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 AC008432.1-201ENST00000615912 1320 ntBASIC4.1□□□□□ -1.75
PDGFBP01127 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFBP01127 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFBP01127 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDGFBP01127 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFBP01127 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFBP01127 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFBP01127 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFBP01127 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFBP01127 RNU6-1293P-201ENST00000384077 107 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 AL592291.1-201ENST00000403830 352 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFBP01127 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFBP01127 NMNAT1P2-201ENST00000435192 860 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFBP01127 AC009263.1-201ENST00000441193 1239 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 AC233982.1-201ENST00000451247 436 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 CYCSP35-201ENST00000451978 304 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 RPS4XP10-201ENST00000465034 731 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
PDGFBP01127 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.09□□□□□ -1.75
PDGFBP01127 AC112518.2-201ENST00000508565 425 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 OR8L1P-201ENST00000534005 955 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFBP01127 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms