Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 HMGN2P25-201ENST00000486956 268 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS4BO75351 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS4BO75351 AC109458.1-201ENST00000508858 316 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS4BO75351 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.88□□□□□ -1.63
VPS4BO75351 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS4BO75351 AC087276.1-201ENST00000529659 480 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS4BO75351 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.88□□□□□ -1.63
VPS4BO75351 EIF1P4-201ENST00000572664 335 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 KPNA2P3-201ENST00000584190 848 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS4BO75351 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS4BO75351 AP003465.2-201ENST00000602571 373 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 AC079089.3-201ENST00000603094 673 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 AL161616.1-201ENST00000611867 286 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS4BO75351 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS4BO75351 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS4BO75351 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS4BO75351 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS4BO75351 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
VPS4BO75351 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS4BO75351 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS4BO75351 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VPS4BO75351 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS4BO75351 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS4BO75351 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS4BO75351 A2MP1-204ENST00000566278 4130 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS4BO75351 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS4BO75351 RNU6-433P-201ENST00000363216 104 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 RNU6-374P-201ENST00000364146 108 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 RNU6-660P-201ENST00000364566 109 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 RNA5SP88-201ENST00000365560 109 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 MIR600-201ENST00000385007 98 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AF274854.1-201ENST00000413236 615 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AL590139.1-201ENST00000416267 400 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS4BO75351 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS4BO75351 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS4BO75351 DNAJC19P7-201ENST00000428811 344 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.87□□□□□ -1.63
VPS4BO75351 AL512649.1-201ENST00000428997 581 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS4BO75351 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS4BO75351 AL512286.1-201ENST00000439244 400 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AL450263.2-201ENST00000439400 589 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AL450023.3-201ENST00000440592 271 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 FHP1-201ENST00000442741 703 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 NDUFA5P7-201ENST00000452914 242 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 RPL5P32-201ENST00000454085 879 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS4BO75351 RNA5SP269-201ENST00000459032 137 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 RN7SL517P-201ENST00000462240 305 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS4BO75351 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS4BO75351 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS4BO75351 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS4BO75351 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
VPS4BO75351 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS4BO75351 AP000790.1-201ENST00000528891 737 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.87□□□□□ -1.63
VPS4BO75351 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS4BO75351 AC005868.1-201ENST00000536421 331 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AC010546.1-201ENST00000569391 485 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS4BO75351 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS4BO75351 AC234771.5-201ENST00000600161 514 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AC083899.3-201ENST00000603413 594 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AC087241.4-201ENST00000612441 480 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS4BO75351 OR2L1P-202ENST00000641567 1023 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS4BO75351 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS4BO75351 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS4BO75351 SCN1A-220ENST00000641603 12506 ntBASIC4.87□□□□□ -1.63
VPS4BO75351 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS4BO75351 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
VPS4BO75351 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VPS4BO75351 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS4BO75351 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS4BO75351 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS4BO75351 THAP12P4-201ENST00000528321 2266 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS4BO75351 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS4BO75351 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS4BO75351 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
VPS4BO75351 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS4BO75351 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS4BO75351 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS4BO75351 UBBP2-201ENST00000376781 231 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 AP000580.1-201ENST00000404439 358 ntBASIC4.86□□□□□ -1.63
VPS4BO75351 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms