Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.11□□□□□ -1.75
ZIC3O60481 AC091965.5-201ENST00000624785 342 ntBASIC4.11□□□□□ -1.75
ZIC3O60481 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZIC3O60481 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZIC3O60481 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ZIC3O60481 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ZIC3O60481 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ZIC3O60481 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ZIC3O60481 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 ELL2P3-201ENST00000457883 1602 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ZIC3O60481 CPHL1P-201ENST00000461341 3407 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.1□□□□□ -1.75
ZIC3O60481 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ZIC3O60481 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 FABP12P1-201ENST00000401911 322 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
ZIC3O60481 MIR1271-201ENST00000408537 86 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.1□□□□□ -1.75
ZIC3O60481 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.1□□□□□ -1.75
ZIC3O60481 SEPT2P1-201ENST00000419651 180 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 AC062016.2-201ENST00000420950 676 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.1□□□□□ -1.75
ZIC3O60481 ELOCP8-201ENST00000439309 332 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 MTND2P20-201ENST00000440805 661 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 ELOCP15-201ENST00000442090 332 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.1□□□□□ -1.75
ZIC3O60481 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.1□□□□□ -1.75
ZIC3O60481 SLC31A1P1-201ENST00000451221 567 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 DDX39BP2-208ENST00000453923 258 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.1□□□□□ -1.75
ZIC3O60481 MTND2P28-201ENST00000457540 1044 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.1□□□□□ -1.75
ZIC3O60481 KLRA1P-201ENST00000503499 986 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.1□□□□□ -1.75
ZIC3O60481 AC002456.2-201ENST00000509356 380 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.1□□□□□ -1.75
ZIC3O60481 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.1□□□□□ -1.75
ZIC3O60481 AC090819.1-201ENST00000523800 1111 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 SLC2A13P1-201ENST00000531560 322 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.1□□□□□ -1.75
ZIC3O60481 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.1□□□□□ -1.75
ZIC3O60481 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.1□□□□□ -1.75
ZIC3O60481 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.1□□□□□ -1.75
ZIC3O60481 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 AC068831.4-201ENST00000556118 109 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.1□□□□□ -1.75
ZIC3O60481 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.1□□□□□ -1.75
ZIC3O60481 MIR3915-201ENST00000578518 97 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 MIR5096-201ENST00000583713 70 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.1□□□□□ -1.75
ZIC3O60481 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.1□□□□□ -1.75
ZIC3O60481 AP000811.1-201ENST00000603803 651 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 AC006270.3-201ENST00000605967 1036 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.1□□□□□ -1.75
ZIC3O60481 AC022106.2-201ENST00000620114 757 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 AC015871.5-202ENST00000623252 701 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 AC098679.5-201ENST00000624394 571 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.1□□□□□ -1.75
ZIC3O60481 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 AC021755.1-201ENST00000559747 1447 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.1□□□□□ -1.75
ZIC3O60481 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
ZIC3O60481 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.1□□□□□ -1.75
ZIC3O60481 LINC00622-201ENST00000562811 1570 ntBASIC4.1□□□□□ -1.75
ZIC3O60481 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZIC3O60481 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ZIC3O60481 AC139713.2-214ENST00000642059 1811 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
ZIC3O60481 AL450326.2-201ENST00000421913 1962 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZIC3O60481 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ZIC3O60481 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ZIC3O60481 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.09□□□□□ -1.75
ZIC3O60481 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ZIC3O60481 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
ZIC3O60481 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZIC3O60481 RNA5SP391-201ENST00000363456 119 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 RNU6-1293P-201ENST00000384077 107 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 U3.22-201ENST00000391120 215 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 DSTNP4-201ENST00000399472 474 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AL021407.1-201ENST00000404531 386 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AL512430.2-201ENST00000406786 339 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 MIR1284-201ENST00000408337 120 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 RN7SKP247-201ENST00000411094 308 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 MORF4L1P6-201ENST00000418771 268 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AC016907.1-201ENST00000419483 435 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AC009480.2-201ENST00000422916 432 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AL732292.1-201ENST00000426692 226 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 RPS12P10-201ENST00000427031 377 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 CEACAMP1-201ENST00000434624 1035 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms