Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RN7SL323P-201ENST00000494712 295 ntBASIC3.32□□□□□ -1.88
SGCEO43556 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.32□□□□□ -1.88
SGCEO43556 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.32□□□□□ -1.88
SGCEO43556 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.32□□□□□ -1.88
SGCEO43556 AC093755.1-201ENST00000512950 1023 ntBASIC3.32□□□□□ -1.88
SGCEO43556 RNA5SP208-201ENST00000516156 78 ntBASIC3.32□□□□□ -1.88
SGCEO43556 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.32□□□□□ -1.88
SGCEO43556 IGHV3-76-201ENST00000522465 295 ntBASIC3.32□□□□□ -1.88
SGCEO43556 OR5D17P-201ENST00000531492 978 ntBASIC3.32□□□□□ -1.88
SGCEO43556 OR8R1P-201ENST00000543943 764 ntBASIC3.32□□□□□ -1.88
SGCEO43556 AC092747.2-201ENST00000545069 983 ntBASIC3.32□□□□□ -1.88
SGCEO43556 AC008011.1-201ENST00000545989 227 ntBASIC3.32□□□□□ -1.88
SGCEO43556 AC074029.1-201ENST00000552531 1044 ntBASIC3.32□□□□□ -1.88
SGCEO43556 POLR2KP1-201ENST00000553226 168 ntBASIC3.32□□□□□ -1.88
SGCEO43556 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.32□□□□□ -1.88
SGCEO43556 AC009268.1-201ENST00000561352 1203 ntBASIC3.32□□□□□ -1.88
SGCEO43556 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.32□□□□□ -1.88
SGCEO43556 AC053481.4-201ENST00000583164 216 ntBASIC3.32□□□□□ -1.88
SGCEO43556 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.32□□□□□ -1.88
SGCEO43556 AC010928.3-201ENST00000587712 541 ntBASIC3.32□□□□□ -1.88
SGCEO43556 AL390816.3-201ENST00000604527 1066 ntBASIC3.32□□□□□ -1.88
SGCEO43556 AL365503.1-201ENST00000605247 905 ntBASIC3.32□□□□□ -1.88
SGCEO43556 AC011816.2-201ENST00000607089 556 ntBASIC3.32□□□□□ -1.88
SGCEO43556 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.32□□□□□ -1.88
SGCEO43556 AC048347.1-201ENST00000624621 427 ntBASIC3.32□□□□□ -1.88
SGCEO43556 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.32□□□□□ -1.88
SGCEO43556 GTF2H2B-203ENST00000508065 1432 ntBASIC3.32□□□□□ -1.88
SGCEO43556 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SGCEO43556 FAM91A3P-201ENST00000456826 2544 ntBASIC3.32□□□□□ -1.88
SGCEO43556 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.32□□□□□ -1.88
SGCEO43556 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCEO43556 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.31□□□□□ -1.88
SGCEO43556 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SGCEO43556 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SGCEO43556 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCEO43556 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SGCEO43556 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SGCEO43556 RN7SKP227-201ENST00000364445 330 ntBASIC3.31□□□□□ -1.88
SGCEO43556 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.31□□□□□ -1.88
SGCEO43556 HSPE1P8-201ENST00000406997 288 ntBASIC3.31□□□□□ -1.88
SGCEO43556 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.31□□□□□ -1.88
SGCEO43556 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCEO43556 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCEO43556 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCEO43556 AL390879.2-203ENST00000426943 1121 ntBASIC3.31□□□□□ -1.88
SGCEO43556 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.31□□□□□ -1.88
SGCEO43556 CYCSP43-201ENST00000438233 310 ntBASIC3.31□□□□□ -1.88
SGCEO43556 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCEO43556 SETD6P1-201ENST00000444575 317 ntBASIC3.31□□□□□ -1.88
SGCEO43556 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCEO43556 AC006480.1-201ENST00000449887 378 ntBASIC3.31□□□□□ -1.88
SGCEO43556 VN1R105P-201ENST00000486595 910 ntBASIC3.31□□□□□ -1.88
SGCEO43556 AC107398.1-201ENST00000486904 505 ntBASIC3.31□□□□□ -1.88
SGCEO43556 AL139099.1-201ENST00000497398 403 ntBASIC3.31□□□□□ -1.88
SGCEO43556 SUMO1P1-201ENST00000497904 306 ntBASIC3.31□□□□□ -1.88
SGCEO43556 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCEO43556 RAC1P2-201ENST00000511164 579 ntBASIC3.31□□□□□ -1.88
SGCEO43556 HMGB1P47-201ENST00000511281 589 ntBASIC3.31□□□□□ -1.88
SGCEO43556 RN7SKP209-201ENST00000516888 304 ntBASIC3.31□□□□□ -1.88
SGCEO43556 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.31□□□□□ -1.88
SGCEO43556 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.31□□□□□ -1.88
SGCEO43556 UBE2NP1-201ENST00000545592 458 ntBASIC3.31□□□□□ -1.88
SGCEO43556 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.31□□□□□ -1.88
SGCEO43556 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.31□□□□□ -1.88
SGCEO43556 AL133457.1-201ENST00000564251 987 ntBASIC3.31□□□□□ -1.88
SGCEO43556 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCEO43556 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCEO43556 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.31□□□□□ -1.88
SGCEO43556 AC084036.1-201ENST00000609190 508 ntBASIC3.31□□□□□ -1.88
SGCEO43556 AC099778.2-201ENST00000610904 211 ntBASIC3.31□□□□□ -1.88
SGCEO43556 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SGCEO43556 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCEO43556 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.31□□□□□ -1.88
SGCEO43556 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCEO43556 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCEO43556 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.31□□□□□ -1.88
SGCEO43556 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCEO43556 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.3□□□□□ -1.88
SGCEO43556 AL157700.1-201ENST00000561973 1432 ntBASIC3.3□□□□□ -1.88
SGCEO43556 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SGCEO43556 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SGCEO43556 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SGCEO43556 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.3□□□□□ -1.88
SGCEO43556 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
SGCEO43556 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SGCEO43556 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.3□□□□□ -1.88
SGCEO43556 MIR7-1-201ENST00000384871 110 ntBASIC3.3□□□□□ -1.88
SGCEO43556 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
SGCEO43556 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SGCEO43556 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.3□□□□□ -1.88
SGCEO43556 SNORA71B-202ENST00000439232 272 ntBASIC3.3□□□□□ -1.88
SGCEO43556 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.3□□□□□ -1.88
SGCEO43556 RN7SL132P-201ENST00000478131 296 ntBASIC3.3□□□□□ -1.88
SGCEO43556 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.3□□□□□ -1.88
SGCEO43556 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.3□□□□□ -1.88
SGCEO43556 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.3□□□□□ -1.88
SGCEO43556 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.3□□□□□ -1.88
SGCEO43556 MIMT1-201ENST00000597105 1050 ntBASIC3.3□□□□□ -1.88
SGCEO43556 AC011492.1-201ENST00000600023 315 ntBASIC3.3□□□□□ -1.88
SGCEO43556 AC110792.4-201ENST00000609843 298 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms