Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU6-254P-201ENST00000363377 107 ntBASIC6.03□□□□□ -1.44
SOX1O00570 Y_RNA.128-201ENST00000363391 112 ntBASIC6.03□□□□□ -1.44
SOX1O00570 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX1O00570 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 RNU6-730P-201ENST00000383954 104 ntBASIC6.03□□□□□ -1.44
SOX1O00570 MTND3P8-201ENST00000412909 339 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AC017078.1-201ENST00000416146 368 ntBASIC6.03□□□□□ -1.44
SOX1O00570 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX1O00570 CYP4F30P-202ENST00000420048 405 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX1O00570 CBX1P4-201ENST00000439415 457 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX1O00570 AC073264.2-201ENST00000448886 166 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AC006480.1-201ENST00000449887 378 ntBASIC6.03□□□□□ -1.44
SOX1O00570 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX1O00570 AC034236.1-201ENST00000469891 373 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.03□□□□□ -1.44
SOX1O00570 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX1O00570 GAPDHP56-201ENST00000506031 988 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX1O00570 TRMT10BP1-201ENST00000519377 943 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX1O00570 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.03□□□□□ -1.44
SOX1O00570 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX1O00570 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX1O00570 AC090312.1-201ENST00000580637 348 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX1O00570 MIR5096-201ENST00000583713 70 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.03□□□□□ -1.44
SOX1O00570 AC093913.1-201ENST00000614178 329 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AC109583.2-201ENST00000617367 129 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AC233309.1-201ENST00000619522 751 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AC090971.5-201ENST00000621102 293 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AL356585.4-201ENST00000623078 1229 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AC091905.4-201ENST00000623432 202 ntBASIC6.03□□□□□ -1.44
SOX1O00570 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX1O00570 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX1O00570 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SOX1O00570 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX1O00570 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SOX1O00570 AL034546.1-201ENST00000623740 3693 ntBASIC6.03□□□□□ -1.44
SOX1O00570 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX1O00570 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
SOX1O00570 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX1O00570 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX1O00570 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX1O00570 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX1O00570 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX1O00570 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX1O00570 RNU6-1160P-201ENST00000384546 104 ntBASIC6.02□□□□□ -1.45
SOX1O00570 MIR548P-201ENST00000408336 84 ntBASIC6.02□□□□□ -1.45
SOX1O00570 AC009237.10-201ENST00000414112 510 ntBASIC6.02□□□□□ -1.45
SOX1O00570 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX1O00570 AL713922.1-201ENST00000416477 747 ntBASIC6.02□□□□□ -1.45
SOX1O00570 AC009161.1-201ENST00000417306 376 ntBASIC6.02□□□□□ -1.45
SOX1O00570 AL353777.1-201ENST00000425552 326 ntBASIC6.02□□□□□ -1.45
SOX1O00570 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX1O00570 AC004975.1-201ENST00000428733 208 ntBASIC6.02□□□□□ -1.45
SOX1O00570 IFNA20P-201ENST00000436840 528 ntBASIC6.02□□□□□ -1.45
SOX1O00570 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX1O00570 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX1O00570 BNIP3P2-201ENST00000441221 577 ntBASIC6.02□□□□□ -1.45
SOX1O00570 GAPDHP14-201ENST00000450472 937 ntBASIC6.02□□□□□ -1.45
SOX1O00570 AC130509.1-201ENST00000464158 433 ntBASIC6.02□□□□□ -1.45
SOX1O00570 RPS15AP17-201ENST00000470598 390 ntBASIC6.02□□□□□ -1.45
SOX1O00570 RPS3AP50-201ENST00000487064 803 ntBASIC6.02□□□□□ -1.45
SOX1O00570 UBA52P3-201ENST00000491303 382 ntBASIC6.02□□□□□ -1.45
SOX1O00570 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX1O00570 PCBP2P3-201ENST00000509726 843 ntBASIC6.02□□□□□ -1.45
SOX1O00570 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX1O00570 AC022861.1-201ENST00000522981 663 ntBASIC6.02□□□□□ -1.45
SOX1O00570 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.02□□□□□ -1.45
SOX1O00570 SULT1C2P1-202ENST00000562418 459 ntBASIC6.02□□□□□ -1.45
SOX1O00570 AC093249.1-201ENST00000567049 203 ntBASIC6.02□□□□□ -1.45
SOX1O00570 MIR3171-201ENST00000584270 74 ntBASIC6.02□□□□□ -1.45
SOX1O00570 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX1O00570 AL031320.1-201ENST00000604177 357 ntBASIC6.02□□□□□ -1.45
SOX1O00570 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX1O00570 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SOX1O00570 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX1O00570 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SOX1O00570 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX1O00570 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX1O00570 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX1O00570 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SOX1O00570 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SOX1O00570 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX1O00570 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.02□□□□□ -1.45
SOX1O00570 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SOX1O00570 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX1O00570 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX1O00570 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX1O00570 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX1O00570 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
SOX1O00570 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms