Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 NANOGP10-201ENST00000453325 895 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 HSFY5P-201ENST00000453726 309 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AL035407.2-201ENST00000454090 378 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 GTF2IP12-201ENST00000456547 356 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AL035404.1-201ENST00000497982 568 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC053481.3-201ENST00000577881 843 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC090666.1-201ENST00000578241 445 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC068620.3-201ENST00000602749 560 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AL391497.1-201ENST00000608671 547 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC018645.2-201ENST00000609151 472 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 OR6R2P-201ENST00000609216 300 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC006213.4-201ENST00000616184 634 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC004825.2-201ENST00000616634 455 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC007275.1-201ENST00000621243 671 ntBASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEDD8-MDP1E9PL57 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NEDD8-MDP1E9PL57 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
NEDD8-MDP1E9PL57 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.96□□□□□ -1.77
NEDD8-MDP1E9PL57 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 AL590290.1-201ENST00000405336 380 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 TRGV6-201ENST00000417928 299 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 MTCO1P54-201ENST00000430139 712 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 RPL37P1-201ENST00000432310 284 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 Z74696.2-201ENST00000436514 498 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 AC092013.1-201ENST00000438795 332 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 GXYLT1P1-201ENST00000446657 490 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 AL358232.1-201ENST00000448030 501 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 HNRNPKP5-201ENST00000515300 253 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 OR5M7P-201ENST00000526140 972 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 DEFB109D-201ENST00000529497 240 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 AC023825.1-201ENST00000566704 1030 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 AC018552.3-201ENST00000567416 561 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 MTND4LP24-201ENST00000572277 291 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 BNIP3P27-201ENST00000599991 412 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 AC125494.3-201ENST00000602759 455 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 AC006946.3-201ENST00000609791 756 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 U6.48-201ENST00000618523 106 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 MIR6075-201ENST00000620782 95 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 AL391262.2-201ENST00000622466 494 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 AC024595.1-201ENST00000623088 387 ntBASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEDD8-MDP1E9PL57 MTND4P31-201ENST00000425607 1343 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AL445437.1-201ENST00000623157 3087 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 SNORA71.3-201ENST00000362582 128 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 SNORA73.2-201ENST00000364946 201 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 MIR1303-201ENST00000408625 86 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 RNU2-6P-201ENST00000411404 190 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 CYP4F29P-201ENST00000420685 446 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 NPM1P24-201ENST00000428039 894 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 YWHAEP5-201ENST00000431545 765 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 RPS20P1-201ENST00000434853 354 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AL353597.2-202ENST00000434901 373 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 EIF4A1P11-201ENST00000451239 222 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 RPS17P11-201ENST00000474297 293 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AC093801.2-201ENST00000503966 1050 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AC008565.1-201ENST00000509046 885 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms