Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 NMD3P1-201ENST00000439704 1488 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 FRG1CP-201ENST00000358464 769 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 AC234772.1-201ENST00000377927 937 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 NDUFB4P4-201ENST00000404822 243 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 RN7SKP177-201ENST00000410567 355 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 TRIM60P13-201ENST00000432350 1283 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 MRPS33P4-201ENST00000434892 317 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 MTND6P18-201ENST00000439477 513 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 AC021205.1-201ENST00000468797 348 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 AC025181.1-201ENST00000477507 416 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 AL358832.1-201ENST00000497800 389 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 WBP1LP4-201ENST00000505043 344 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 AC016550.3-201ENST00000515706 767 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 AC099489.2-201ENST00000574976 260 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 AC034236.3-201ENST00000605999 461 ntBASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
NPC1L1Q9UHC9 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AC107027.3-201ENST00000565095 3473 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 OR52E6-202ENST00000379946 954 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 MIR218-2-201ENST00000385006 110 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 MT-TP-201ENST00000387461 68 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 RSL24D1P1-201ENST00000404972 493 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AL603766.1-201ENST00000407763 664 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 Z98941.1-201ENST00000407764 100 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 Z92545.1-201ENST00000411782 234 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AC073136.2-201ENST00000417282 849 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AL627224.1-201ENST00000448334 444 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 CLIC4P1-201ENST00000453177 535 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AP002345.1-201ENST00000456493 928 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AC021205.2-201ENST00000480069 347 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 PCBP2P3-201ENST00000509726 843 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 DEFB109D-201ENST00000529497 240 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 PDCD5P1-201ENST00000543528 309 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AC012414.2-201ENST00000559474 187 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 ELOCP35-201ENST00000604289 336 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 AP001002.2-201ENST00000625137 386 ntBASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.75□□□□□ -1.65
NPC1L1Q9UHC9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 RNU1-33P-201ENST00000364249 162 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 MTND3P20-201ENST00000407663 186 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 AL354710.1-201ENST00000453641 246 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 SNORA59A-201ENST00000459326 152 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 FCF1P3-201ENST00000496394 590 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 FABP5P6-201ENST00000510588 409 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 AC034244.2-201ENST00000514668 858 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 RNU2-27P-201ENST00000516185 142 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 AC007458.1-201ENST00000542812 373 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 KATNBL1P1-201ENST00000605192 748 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 LINC00216-201ENST00000623548 1126 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 AC073073.2-201ENST00000609827 2578 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 AC026523.2-201ENST00000625039 7739 ntBASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.74□□□□□ -1.65
NPC1L1Q9UHC9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 MIR421-201ENST00000365696 85 ntBASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 RPS26P40-201ENST00000435209 294 ntBASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms