Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 LINC01355-201ENST00000566551 5444 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN1Q9P244 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN1Q9P244 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.6□□□□□ -1.67
LRFN1Q9P244 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN1Q9P244 FAM91A3P-201ENST00000456826 2544 ntBASIC4.6□□□□□ -1.67
LRFN1Q9P244 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 RNU6-374P-201ENST00000364146 108 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 RNU6-339P-201ENST00000384310 107 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 SNORA70.10-201ENST00000384515 134 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 CYCSP45-201ENST00000402289 315 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 AC069213.2-201ENST00000420238 366 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AC234781.2-201ENST00000426370 994 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AL365396.1-201ENST00000430854 671 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AC099654.2-201ENST00000433031 1980 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 RPL7P11-201ENST00000437586 658 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 ARPC3P5-201ENST00000448802 534 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 PLGLA-201ENST00000465668 449 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 NIP7P2-201ENST00000485801 544 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AC008897.1-201ENST00000494006 347 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 GAPDHP56-201ENST00000506031 988 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 MTCO3P44-201ENST00000510977 541 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 DEFB109D-201ENST00000529497 240 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 NDUFB4P11-201ENST00000560510 395 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AP000811.1-201ENST00000603803 651 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.59□□□□□ -1.67
LRFN1Q9P244 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.59□□□□□ -1.67
LRFN1Q9P244 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN1Q9P244 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
LRFN1Q9P244 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
LRFN1Q9P244 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
LRFN1Q9P244 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
LRFN1Q9P244 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
LRFN1Q9P244 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
LRFN1Q9P244 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN1Q9P244 AP001642.1-201ENST00000624727 2117 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN1Q9P244 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN1Q9P244 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN1Q9P244 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN1Q9P244 ZNF652P1-201ENST00000442420 1309 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 SNORD82-201ENST00000365530 70 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 RNA5SP87-201ENST00000384155 118 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 MTND4LP20-201ENST00000402379 270 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AL049697.2-201ENST00000403708 294 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 MTCYBP24-201ENST00000420387 1106 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC127537.2-201ENST00000439258 465 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 RPS29P9-201ENST00000440360 171 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 RPL36AP15-201ENST00000444514 266 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 RPL23AP35-201ENST00000451906 501 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AP000942.1-201ENST00000463969 747 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC063943.1-201ENST00000465434 453 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC090453.1-201ENST00000495560 436 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN1Q9P244 MRPS33P2-201ENST00000507850 322 ntBASIC4.58□□□□□ -1.68
LRFN1Q9P244 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN1Q9P244 HMGB3P13-201ENST00000511263 607 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms