Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 RPL32P3-201ENST00000359025 275 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 RNU5A-1-201ENST00000362698 116 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 Y_RNA.395-201ENST00000383945 109 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 MIR606-201ENST00000384851 96 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 MIR498-201ENST00000385134 124 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AL513331.1-201ENST00000411908 397 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 ALDH7A1P4-201ENST00000412255 178 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AC011753.4-201ENST00000417974 311 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 RPL34P3-201ENST00000421454 338 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AC244098.2-201ENST00000422068 99 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 RPL32P28-201ENST00000443577 397 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AL022237.1-201ENST00000446663 358 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 TUBB4BP2-201ENST00000454125 798 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 RPS20P23-201ENST00000461683 354 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 RPS10P20-201ENST00000494130 463 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AC026801.1-201ENST00000497178 464 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 RNU6-927P-201ENST00000516199 100 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AC087854.1-201ENST00000519706 414 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AC008489.1-201ENST00000524271 483 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AC011611.6-201ENST00000547483 255 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AP000942.4-201ENST00000604811 241 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AP001437.1-201ENST00000608783 456 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 AL157817.1-201ENST00000614264 790 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 ATP5A1P2-202ENST00000616464 443 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC8.26□□□□□ -1.09
RTN4Q9NQC3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RTN4Q9NQC3 ATP5A1P10-201ENST00000622403 1603 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC140134.1-201ENST00000511830 3544 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 MIR369-201ENST00000362155 70 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 RNU1-47P-201ENST00000362966 163 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 Y_RNA.197-201ENST00000364004 102 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 RNU6-601P-201ENST00000384540 107 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 HSPE1P8-201ENST00000406997 288 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 RPS12P24-201ENST00000412619 387 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 ATP5HP2-201ENST00000433885 485 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 RPL26P6-201ENST00000440913 438 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 RN7SL861P-201ENST00000473793 285 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 HSPE1P6-201ENST00000479457 291 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 RN7SL335P-201ENST00000482790 304 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 RPS15AP34-201ENST00000487776 387 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AL031864.2-201ENST00000498507 350 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 SCARNA20.3-201ENST00000516913 131 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC069113.1-201ENST00000517763 267 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC105031.1-201ENST00000518550 476 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC015674.1-201ENST00000578482 267 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 PRPF19P1-201ENST00000584766 898 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AL670379.10-201ENST00000604330 253 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AL670379.9-201ENST00000605428 253 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC123788.2-201ENST00000612290 283 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC245407.2-201ENST00000614199 451 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 CU638689.2-201ENST00000623809 818 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AL136964.1-201ENST00000622038 2990 ntBASIC8.25□□□□□ -1.09
RTN4Q9NQC3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
RTN4Q9NQC3 AC010168.2-201ENST00000562691 5428 ntBASIC8.24□□□□□ -1.09
RTN4Q9NQC3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC8.24□□□□□ -1.09
RTN4Q9NQC3 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RTN4Q9NQC3 AC083843.2-201ENST00000568248 6253 ntBASIC8.24□□□□□ -1.09
RTN4Q9NQC3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RTN4Q9NQC3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RTN4Q9NQC3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RTN4Q9NQC3 DEFB108F-201ENST00000344638 222 ntBASIC8.24□□□□□ -1.09
RTN4Q9NQC3 RNA5SP52-201ENST00000362448 134 ntBASIC8.24□□□□□ -1.09
RTN4Q9NQC3 RN7SKP174-201ENST00000363803 330 ntBASIC8.24□□□□□ -1.09
RTN4Q9NQC3 SNORA36C-201ENST00000384289 132 ntBASIC8.24□□□□□ -1.09
RTN4Q9NQC3 RNU6-14P-201ENST00000384630 106 ntBASIC8.24□□□□□ -1.09
RTN4Q9NQC3 NPM1P46-201ENST00000399556 865 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms