Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 YES1-203ENST00000577961 4554 ntTSL 5 BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 U3.12-201ENST00000364498 214 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 RN7SKP192-201ENST00000411291 327 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 AL691447.1-201ENST00000419456 387 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 AL353729.1-201ENST00000425044 720 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 AL513328.1-201ENST00000446460 224 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 HMGB3P12-201ENST00000438745 556 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 AC093156.1-201ENST00000440382 670 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 RN7SL499P-201ENST00000481141 276 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 RNA5SP439-201ENST00000617595 124 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 AL049780.3-201ENST00000624612 1583 ntBASIC3.14□□□□□ -1.91
CHD8Q9HCK8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHD8Q9HCK8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 AL157385.1-201ENST00000446973 268 ntBASIC3.13□□□□□ -1.91
CHD8Q9HCK8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 RN7SL622P-201ENST00000585292 275 ntBASIC3.13□□□□□ -1.91
CHD8Q9HCK8 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 AL022393.1-201ENST00000625142 1677 ntBASIC3.13□□□□□ -1.91
CHD8Q9HCK8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 Y_RNA.374-201ENST00000365606 101 ntBASIC3.13□□□□□ -1.91
CHD8Q9HCK8 HIGD1AP12-201ENST00000427832 281 ntBASIC3.13□□□□□ -1.91
CHD8Q9HCK8 AC087312.1-201ENST00000471411 480 ntBASIC3.13□□□□□ -1.91
CHD8Q9HCK8 RPL23AP11-201ENST00000475260 469 ntBASIC3.13□□□□□ -1.91
CHD8Q9HCK8 AC025554.1-201ENST00000505641 188 ntBASIC3.13□□□□□ -1.91
CHD8Q9HCK8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 AC009812.2-201ENST00000517657 457 ntBASIC3.13□□□□□ -1.91
CHD8Q9HCK8 CKS1BP1-201ENST00000555221 240 ntBASIC3.13□□□□□ -1.91
CHD8Q9HCK8 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 AC012603.1-201ENST00000606424 528 ntBASIC3.13□□□□□ -1.91
CHD8Q9HCK8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHD8Q9HCK8 AL672167.1-206ENST00000356293 943 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 MIR337-201ENST00000362281 93 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 SNORA18.3-201ENST00000384122 132 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 MIR613-201ENST00000385248 95 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 AL513043.1-201ENST00000439124 535 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 AC023161.2-201ENST00000551218 780 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 AC090877.1-201ENST00000561418 344 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 AL359535.1-201ENST00000612100 1087 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 AC125336.1-201ENST00000508893 2827 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 MTCO1P8-201ENST00000416914 1523 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 OR51A3P-201ENST00000413596 924 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 AL592045.1-201ENST00000429867 352 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 RPS20P1-201ENST00000434853 354 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 NDUFA5P4-201ENST00000436704 385 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 RPSAP41-201ENST00000439695 860 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 RPL9P32-201ENST00000464118 620 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 RN7SKP46-201ENST00000515942 234 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 YWHAZP1-201ENST00000556286 722 ntBASIC3.12□□□□□ -1.91
CHD8Q9HCK8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms