Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 AP001269.3-201ENST00000588718 329 ntBASIC4.37□□□□□ -1.71
PCDH9Q9HC56 ELOCP28-201ENST00000590044 317 ntBASIC4.37□□□□□ -1.71
PCDH9Q9HC56 AC021171.1-201ENST00000603137 706 ntBASIC4.37□□□□□ -1.71
PCDH9Q9HC56 AC079416.3-201ENST00000624479 549 ntBASIC4.37□□□□□ -1.71
PCDH9Q9HC56 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 AC008013.2-202ENST00000637965 364 ntBASIC4.37□□□□□ -1.71
PCDH9Q9HC56 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 MTND4P31-201ENST00000425607 1343 ntBASIC4.37□□□□□ -1.71
PCDH9Q9HC56 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDH9Q9HC56 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 RNU6-1214P-201ENST00000363650 109 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 SNORA40.2-201ENST00000390847 128 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AL583835.1-201ENST00000399570 407 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AL450992.3-201ENST00000413192 568 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AL807761.1-201ENST00000417622 171 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 OR5AW1P-201ENST00000426334 1006 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 NANOGP6-201ENST00000429190 847 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 CBX1P1-201ENST00000440184 427 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 MTND2P22-201ENST00000444325 1033 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 NDUFA5P9-201ENST00000472609 340 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC034244.1-201ENST00000507687 207 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 HNRNPKP5-201ENST00000515300 253 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC092747.2-201ENST00000545069 983 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC084757.1-201ENST00000559987 490 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC090751.1-201ENST00000566966 267 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 MTND4LP24-201ENST00000572277 291 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 MIR4284-201ENST00000578924 81 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC005412.1-201ENST00000580812 1049 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AL353778.1-201ENST00000603149 408 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC012603.1-201ENST00000606424 528 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 TUSC7.1-201ENST00000610969 165 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC017037.3-201ENST00000625016 472 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AC087821.2-201ENST00000637086 450 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 AL133243.3-201ENST00000617415 3004 ntBASIC4.36□□□□□ -1.71
PCDH9Q9HC56 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PCDH9Q9HC56 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 snoZ40.1-201ENST00000364540 72 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 ERHP2-201ENST00000402323 299 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 RNU6-575P-201ENST00000411326 105 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 FAR2P2-201ENST00000413041 594 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC011933.1-201ENST00000413334 321 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC004552.1-201ENST00000419089 348 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AL592293.2-201ENST00000422292 996 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 FAR2P4-202ENST00000425399 584 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 RPL18P10-201ENST00000425606 538 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 RPS3AP54-201ENST00000435535 734 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 RPS7P5-201ENST00000441482 581 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AL512326.1-201ENST00000443050 721 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 MRPL42P4-201ENST00000453267 443 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms