Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC048346.1-201ENST00000510247 144 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC109471.1-201ENST00000511631 612 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 RN7SKP92-201ENST00000517266 244 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC103987.3-201ENST00000582071 292 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AP001981.2-201ENST00000603241 418 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AL590229.1-201ENST00000603497 542 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 DUXAP11-201ENST00000603858 526 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 MIR7703-201ENST00000620784 77 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC140113.4-201ENST00000622087 222 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 Z69908.1-201ENST00000622603 247 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 FP325313.1-201ENST00000638228 703 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 NEAT1-202ENST00000501122 22743 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC135352.1-201ENST00000506173 1418 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 DHX40P1-201ENST00000588725 1412 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 MTND4P34-201ENST00000572715 1371 ntBASIC4.78□□□□□ -1.64
USP29Q9HBJ7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
USP29Q9HBJ7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 RNA5SP151-201ENST00000365632 117 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 RPS3AP26-201ENST00000398259 784 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 GLULP6-201ENST00000399502 913 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 NCSTNP1-201ENST00000406229 144 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AL356967.1-201ENST00000406305 431 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AL035407.1-201ENST00000429211 571 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC098826.1-201ENST00000433943 471 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 PPIAP13-201ENST00000434706 478 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC016831.4-201ENST00000438302 307 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 RPL12P26-201ENST00000452430 487 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 MTCO2P18-201ENST00000457151 658 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 HMGB3P13-201ENST00000511263 607 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 GTF2IP8-201ENST00000560687 584 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 RN7SL652P-201ENST00000577769 300 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC025165.5-201ENST00000602802 578 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC018714.1-201ENST00000605028 208 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC090425.2-201ENST00000608818 501 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AC090017.1-201ENST00000548612 1779 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AL592182.3-201ENST00000642132 3304 ntBASIC4.77□□□□□ -1.65
USP29Q9HBJ7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP29Q9HBJ7 AL136164.3-201ENST00000624429 3978 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 EOGT-210ENST00000615922 1931 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms