Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 AC006946.3-201ENST00000609791 756 ntBASIC5.04□□□□□ -1.6
SCAPERQ9BY12 CEP170P1-201ENST00000502249 4587 ntBASIC5.04□□□□□ -1.6
SCAPERQ9BY12 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 AC011503.2-201ENST00000594230 1500 ntBASIC5.03□□□□□ -1.6
SCAPERQ9BY12 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 Z99755.1-201ENST00000414048 380 ntBASIC5.03□□□□□ -1.6
SCAPERQ9BY12 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 MRPL35P4-201ENST00000453682 566 ntBASIC5.03□□□□□ -1.6
SCAPERQ9BY12 AC008885.1-201ENST00000514930 301 ntBASIC5.03□□□□□ -1.6
SCAPERQ9BY12 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SCAPERQ9BY12 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 MIR449A-201ENST00000362113 91 ntBASIC5.02□□□□□ -1.61
SCAPERQ9BY12 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 SNORA48.8-201ENST00000391324 134 ntBASIC5.02□□□□□ -1.61
SCAPERQ9BY12 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 MRPS18BP2-201ENST00000434310 759 ntBASIC5.02□□□□□ -1.61
SCAPERQ9BY12 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 DUXAP6-201ENST00000553858 601 ntBASIC5.02□□□□□ -1.61
SCAPERQ9BY12 AC078899.5-201ENST00000612475 178 ntBASIC5.02□□□□□ -1.61
SCAPERQ9BY12 AC105227.2-201ENST00000615075 605 ntBASIC5.02□□□□□ -1.61
SCAPERQ9BY12 AL158062.1-201ENST00000619632 745 ntBASIC5.02□□□□□ -1.61
SCAPERQ9BY12 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCAPERQ9BY12 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SCAPERQ9BY12 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCAPERQ9BY12 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCAPERQ9BY12 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCAPERQ9BY12 OR6K4P-201ENST00000423179 955 ntBASIC5.01□□□□□ -1.61
SCAPERQ9BY12 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.01□□□□□ -1.61
SCAPERQ9BY12 AC239809.1-201ENST00000450470 217 ntBASIC5.01□□□□□ -1.61
SCAPERQ9BY12 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.01□□□□□ -1.61
SCAPERQ9BY12 HMGB3P14-201ENST00000494195 599 ntBASIC5.01□□□□□ -1.61
SCAPERQ9BY12 PSMA2P1-201ENST00000526365 646 ntBASIC5.01□□□□□ -1.61
SCAPERQ9BY12 AC026333.2-201ENST00000542164 106 ntBASIC5.01□□□□□ -1.61
SCAPERQ9BY12 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCAPERQ9BY12 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.01□□□□□ -1.61
SCAPERQ9BY12 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.01□□□□□ -1.61
SCAPERQ9BY12 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.01□□□□□ -1.61
SCAPERQ9BY12 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SCAPERQ9BY12 SRP72P2-201ENST00000344851 1979 ntBASIC5.01□□□□□ -1.61
SCAPERQ9BY12 AC012078.1-201ENST00000405035 1646 ntBASIC5.01□□□□□ -1.61
SCAPERQ9BY12 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
SCAPERQ9BY12 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5□□□□□ -1.61
SCAPERQ9BY12 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SCAPERQ9BY12 RNU1-70P-201ENST00000362618 164 ntBASIC5□□□□□ -1.61
SCAPERQ9BY12 SNORA54-201ENST00000384281 123 ntBASIC5□□□□□ -1.61
SCAPERQ9BY12 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5□□□□□ -1.61
SCAPERQ9BY12 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5□□□□□ -1.61
SCAPERQ9BY12 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5□□□□□ -1.61
SCAPERQ9BY12 AC005002.1-201ENST00000447458 540 ntBASIC5□□□□□ -1.61
SCAPERQ9BY12 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5□□□□□ -1.61
SCAPERQ9BY12 NPM1P17-201ENST00000479221 602 ntBASIC5□□□□□ -1.61
SCAPERQ9BY12 AC005798.1-201ENST00000513715 387 ntBASIC5□□□□□ -1.61
SCAPERQ9BY12 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5□□□□□ -1.61
SCAPERQ9BY12 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5□□□□□ -1.61
SCAPERQ9BY12 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5□□□□□ -1.61
SCAPERQ9BY12 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5□□□□□ -1.61
SCAPERQ9BY12 MIR3945-201ENST00000581853 98 ntBASIC5□□□□□ -1.61
SCAPERQ9BY12 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5□□□□□ -1.61
SCAPERQ9BY12 AC018692.3-201ENST00000623929 123 ntBASIC5□□□□□ -1.61
SCAPERQ9BY12 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SCAPERQ9BY12 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SCAPERQ9BY12 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SCAPERQ9BY12 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SCAPERQ9BY12 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5□□□□□ -1.61
SCAPERQ9BY12 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SCAPERQ9BY12 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.99□□□□□ -1.61
SCAPERQ9BY12 RNU6-283P-201ENST00000364788 107 ntBASIC4.99□□□□□ -1.61
SCAPERQ9BY12 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.99□□□□□ -1.61
SCAPERQ9BY12 RNA5SP356-201ENST00000515972 94 ntBASIC4.99□□□□□ -1.61
SCAPERQ9BY12 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.99□□□□□ -1.61
SCAPERQ9BY12 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.99□□□□□ -1.61
SCAPERQ9BY12 AC013412.1-201ENST00000610687 192 ntBASIC4.99□□□□□ -1.61
SCAPERQ9BY12 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.99□□□□□ -1.61
SCAPERQ9BY12 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCAPERQ9BY12 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
SCAPERQ9BY12 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCAPERQ9BY12 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCAPERQ9BY12 RNA5SP235-201ENST00000365411 114 ntBASIC4.98□□□□□ -1.61
SCAPERQ9BY12 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 AC074367.1-201ENST00000438685 1125 ntBASIC4.98□□□□□ -1.61
SCAPERQ9BY12 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms