Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNA5SP175-201ENST00000364275 119 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SALL3Q9BXA9 OR5H15-201ENST00000383696 930 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC006366.1-201ENST00000422002 759 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 RAC1P8-201ENST00000427086 527 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 RPS3AP54-201ENST00000435535 734 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 RPS24P1-201ENST00000438550 371 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 MTCYBP3-201ENST00000445588 1137 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 HMGB1P48-201ENST00000446155 598 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 MTND4P18-201ENST00000447010 465 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SALL3Q9BXA9 RPL23AP81-201ENST00000455252 467 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.23□□□□□ -1.57
SALL3Q9BXA9 SRRM1P2-201ENST00000464531 1192 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC011276.1-201ENST00000469688 323 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC008885.2-201ENST00000509506 930 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 PPBPP1-201ENST00000510807 373 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC008958.1-201ENST00000511047 682 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC108120.2-201ENST00000512973 294 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.23□□□□□ -1.57
SALL3Q9BXA9 MTCYBP19-201ENST00000517463 1124 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.23□□□□□ -1.57
SALL3Q9BXA9 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SALL3Q9BXA9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AL121834.1-201ENST00000572284 509 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AP005262.1-201ENST00000582646 997 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 MIR4999-201ENST00000585029 91 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AL020997.2-201ENST00000602607 184 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AL031281.1-201ENST00000604049 488 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC067959.1-201ENST00000604334 379 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 MIR432-201ENST00000606207 94 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 FAM27D1-201ENST00000612308 341 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC007494.3-201ENST00000624660 743 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AL356121.2-201ENST00000624715 780 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 AC019226.1-201ENST00000625666 515 ntBASIC5.23□□□□□ -1.57
SALL3Q9BXA9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 VPS35P1-201ENST00000563400 1518 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC010300.1-201ENST00000600671 5134 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 FAM3C2-201ENST00000312214 681 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 NACA3P-201ENST00000359690 648 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 RNA5SP509-201ENST00000364577 119 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 RNU4-7P-201ENST00000364758 141 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 RNU6-517P-201ENST00000384362 110 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AL590084.2-201ENST00000401481 382 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 OR6C64P-201ENST00000419708 825 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 EIF4EP1-201ENST00000422311 642 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AL512326.1-201ENST00000443050 721 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 TPMTP4-201ENST00000450749 678 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 HMGB1P5-202ENST00000451497 985 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 MTCYBP1-201ENST00000454315 1119 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC093899.1-201ENST00000457984 376 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC022795.1-201ENST00000473808 480 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 RPL35P6-201ENST00000490024 372 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC025459.1-201ENST00000504072 156 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC010424.1-201ENST00000506336 297 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AL592156.1-201ENST00000508758 304 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 RNA5SP49-201ENST00000516450 115 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 SNORA31.13-201ENST00000516624 135 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC074051.3-201ENST00000570238 358 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 SS18L2P2-201ENST00000583960 235 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AL161729.3-201ENST00000603533 673 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AL122125.1-201ENST00000616999 600 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SALL3Q9BXA9 CR381670.1-201ENST00000624291 1693 ntBASIC5.22□□□□□ -1.57
SALL3Q9BXA9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SALL3Q9BXA9 AC083843.3-201ENST00000623679 2186 ntBASIC5.21□□□□□ -1.58
SALL3Q9BXA9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.21□□□□□ -1.58
SALL3Q9BXA9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms