Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.77□□□□□ -1.33
HLA-CQ95604 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HLA-CQ95604 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.77□□□□□ -1.33
HLA-CQ95604 Y_RNA.39-201ENST00000362620 98 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 RNU6-960P-201ENST00000364056 120 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 RNU5E-6P-201ENST00000365574 115 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 Y_RNA.424-201ENST00000384063 103 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 RNU2-23P-201ENST00000410545 195 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-CQ95604 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.77□□□□□ -1.33
HLA-CQ95604 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-CQ95604 RPL36P19-201ENST00000430744 301 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 AC236972.1-201ENST00000433225 199 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 AC023141.3-201ENST00000436698 278 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 CYCSP24-201ENST00000445119 316 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 AC104073.1-201ENST00000451988 151 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 HMGB3P30-201ENST00000457863 606 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 SCARNA18-201ENST00000459004 134 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 RNU6-1132P-201ENST00000459214 107 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
HLA-CQ95604 AC068781.1-201ENST00000488231 618 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-CQ95604 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-CQ95604 AC024224.1-201ENST00000538284 609 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.77□□□□□ -1.33
HLA-CQ95604 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-CQ95604 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.77□□□□□ -1.33
HLA-CQ95604 AL606534.2-204ENST00000635008 178 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.77□□□□□ -1.33
HLA-CQ95604 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HLA-CQ95604 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.77□□□□□ -1.33
HLA-CQ95604 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HLA-CQ95604 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
HLA-CQ95604 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.76□□□□□ -1.33
HLA-CQ95604 Y_RNA.276-201ENST00000364732 109 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 Y_RNA.399-201ENST00000383955 105 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 RNU6-472P-201ENST00000384299 107 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 SNORA24.1-201ENST00000384401 135 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 RNA5SP219-201ENST00000390940 113 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 OR3A2-201ENST00000408891 1076 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AL355433.1-201ENST00000422804 300 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 RPL23AP38-201ENST00000423801 469 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AC130360.1-201ENST00000425489 1117 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.76□□□□□ -1.33
HLA-CQ95604 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.76□□□□□ -1.33
HLA-CQ95604 RPS15AP27-201ENST00000449183 343 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-CQ95604 AP006222.1-205ENST00000450734 457 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-CQ95604 AL445665.1-202ENST00000452436 324 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 RPL36AP13-201ENST00000457490 317 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AC245028.2-201ENST00000458673 253 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 PLGLA-201ENST00000465668 449 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 RN7SL643P-201ENST00000471845 291 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AC063943.2-201ENST00000495697 534 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AC021146.3-201ENST00000511911 260 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 RNA5SP362-201ENST00000516048 118 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 RNU6-1023P-201ENST00000516137 106 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AC130365.2-201ENST00000525882 1201 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.76□□□□□ -1.33
HLA-CQ95604 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.76□□□□□ -1.33
HLA-CQ95604 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-CQ95604 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.76□□□□□ -1.33
HLA-CQ95604 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
HLA-CQ95604 AC010547.6-201ENST00000571789 193 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.76□□□□□ -1.33
HLA-CQ95604 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-CQ95604 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.76□□□□□ -1.33
HLA-CQ95604 SUMO2P15-201ENST00000604285 278 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 U2.17-201ENST00000611454 95 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AL118522.2-201ENST00000616045 615 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AL138825.1-201ENST00000618587 192 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AC015967.1-201ENST00000619893 476 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 U6.104-201ENST00000637979 90 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
HLA-CQ95604 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 AL359396.1-201ENST00000623151 2376 ntBASIC6.76□□□□□ -1.33
HLA-CQ95604 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HLA-CQ95604 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms